Query= MSMg01no475_l02.b1 MSMg01no475_l02.b1 CHROMAT_FILE:
MSMg01no475_l02.b1 PHD_FILE: MSMg01no475_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:33 2005
(462 letters)
>mm_chr1_100016008_100016868
Length = 861
Score = 824 bits (426), Expect = 0.0
Identities = 453/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 aggtttgttactgctttttctaaaaccattcttctcttcatgctgttgtgtgtgtgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtttgttactgctttttctaaaaccattcttctcttcatgctgttgtgtgtgtgtggg 260
Query: 61 catttgcctgtgtttatgtctgtgtgccacgcgagctcagtgcctgcagcgcaggggtgg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 catttgcctgtgtttatgtctgtgtgctacgcgagctcagtgcctgcagcgcaggggtgg 320
Query: 121 ggttcagattctccggtactggatttacagacgacagtgagctgccatggcaggactgag 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttcagattctccggaactggatttacagacgacagtgagctgccatggcaggactgag 380
Query: 181 aatgcaaccctgccttggaagagcagccagttctcttaacagctgagctgtctctgctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgcaaccctgccttggaagagcagccagttctcttaacagctgagctgtctctgctat 440
Query: 241 ttttaaagatgttacttagtaaatatttaaacttttctagcttgaagtttaaaaaatatt 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaaagatgttacg-agtaaatatttaaacttttctagcttgaagtttaaaaaatatt 499
Query: 301 tttagtaatcattgcaaatttcatacatatttttatcagattcactttgtcccagatcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttagtaatcattgcaaatttcatacatatttttatcagattcactttgtcccagatcct 559
Query: 361 ccaagatctacaacccccactcatacctacctaactctgtgccctcttcttccccccctc 420
|||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 560 ccaagatctacaacccccgctcatacctacctaactccgtgtcctcttcttccccccctc 619
Query: 421 ctccccctcccaccttccctctctctccccttctttcttccc 462
||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 620 ctccccctcccaccttccctctctctctctttctttcttccc 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 861
Length adjustment: 10
Effective length of query: 452
Effective length of database: 851
Effective search space: 384652
Effective search space used: 384652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_l02.g1 MSMg01no475_l02.g1 CHROMAT_FILE:
MSMg01no475_l02.g1 PHD_FILE: MSMg01no475_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:33 2005
(382 letters)
>mm_chr1_100149297_100150078
Length = 782
Score = 659 bits (341), Expect = 0.0
Identities = 365/373 (97%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 1 ttccaaagactcctagctagaaagtgatctcagtaaaaacacaggcattccacggaatcc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 372 ttccaaagactcctagctagaaagtgacctcagtaaaaacacaggcattccacagaatcc 313
Query: 61 actgttaactattgtgctgtagtgggtccaaagccagcagacttgctttttcctgttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actgttaactattgtgctgtagtgggtccaaagccagcagacttgctttttcctgttcag 253
Query: 121 ctgatttcactttacttcaaaatataaaatttttatgatggtaagtggtctaatattgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctgatttcactttacttcaaaatataaaatttttatgatggtaagtggtctaatattgct 193
Query: 181 gtctcttgtgaggctacgctggggactagcaaacataaaagtggatgctcacagttacct 240
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||
Sbjct: 192 gtctcttgtgaggctacgctggggactagcaaacacagaagtggatgctcacagttagct 133
Query: 241 attgtatggatcacagggcccccaatggaggagctagagaaattacccaaggagctaaag 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 attggatggatcacagggcccccaatggaggagctagagaaattacccaaggagctaaag 73
Query: 301 gaatctgcaaccctataggtggaacaacaatatgaactaaccagtacccccccaaagctt 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 72 gaatctgcaaccctataggtggaacaacaatatgaactaaccagta-ccccccaaagctc 14
Query: 361 atgtctctagctg 373
|||||||||||||
Sbjct: 13 atgtctctagctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
