Query= MSMg01no475_m13.b1 MSMg01no475_m13.b1 CHROMAT_FILE:
MSMg01no475_m13.b1 PHD_FILE: MSMg01no475_m13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:40 2005
(184 letters)
>mm_chr1_133962730_133963316
Length = 587
Score = 331 bits (171), Expect = 2e-95
Identities = 179/183 (97%), Gaps = 3/183 (1%)
Strand = Plus / Minus
Query: 1 gtgcctattagcactttgtgggtctgggatagaatcggatatacaggaattctgaaaata 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 355 gtgcctattagcactttgtgggtctgggatagaatcggatatataggaattctgaaaata 296
Query: 61 tgttcagctagaaaattcatgaaaaggaggagggggtatctctgaatgtcagaggagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgttcagctagaaaattcatgaaaaggaggagggggtatctctgaatgtcagaggagggg 236
Query: 121 ccc---tgttgtttggaagtgctgggagggggtccgttgttgttgtttgttgttgttgtt 177
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccctgttgttgtttggaagtgctgggagggggtccgttgttgttgtttgttgttgttgtt 176
Query: 178 gtt 180
|||
Sbjct: 175 gtt 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 587
Length adjustment: 8
Effective length of query: 176
Effective length of database: 579
Effective search space: 101904
Effective search space used: 101904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_m13.g1 MSMg01no475_m13.g1 CHROMAT_FILE:
MSMg01no475_m13.g1 PHD_FILE: MSMg01no475_m13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:40 2005
(236 letters)
>mm_chr1_133784229_133784864
Length = 636
Score = 447 bits (231), Expect = e-130
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 1 aataaattctatgtggattttgtaaggctcacgtcaaacatagggattaattttagagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaattctatgtggattttgtaaggctcacgtcaaacatagggattaattttagagaa 260
Query: 61 tcataacaatatccttgattcatgcctgatgacccaagttccctggaatacaacaagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcataacaatatccttgattcatgcctgatgacccaagttccctggaatacaacaagcct 320
Query: 121 gatatgatggtgtgtctgtaattccagaactctaacagtgagatagaaagtggaggaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatgatggtgtgtctgtaattccagaactctaacagtgagatagaaagtggaggaaga 380
Query: 181 ggatgctggaagttcccaggcctcttagcctagtatatgcagtgcagcagaaacc 235
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ggatgctggaagttcccaggcctcttagcctagtatatgcagtgcagtagaaacc 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
