Query= MSMg01no476_l02.b1 MSMg01no476_l02.b1 CHROMAT_FILE:
MSMg01no476_l02.b1 PHD_FILE: MSMg01no476_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:52 2005
(404 letters)
>mm_chr1_159434559_159435361
Length = 803
Score = 746 bits (386), Expect = 0.0
Identities = 401/408 (98%), Gaps = 5/408 (1%)
Strand = Plus / Plus
Query: 1 ccatttttctgagaccgcagctctcccctatgcaagtccaacactgagagcctcttctgg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatttttctgaaaccgcagctctcccctatgcaagtccaacactgagagcctcttctgg 260
Query: 61 tctagcaaatacaaacaatagacattgaccttctcatccacgcatatgcttacttgatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagcaaatacaaacaatagacattgaccttctcatccacgcatatgcttacttgatac 320
Query: 121 atagccttagagtgattgaacagcttgaatttttctaaactttccacattagaaatttgt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 atagccttagagtgattgaacagcttgaatttt-ctaaactttccacattagaaatttgt 379
Query: 181 tattcattttattttatgtcaacccatatacttactcttttatttacctatttccatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattcattttattttatgtcaacccatatacttactcttttatttacctatttccatcat 439
Query: 241 tttttcatacattatattttgatgatgtttttctgctccctcaacccctccccacttttg 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 440 tttttcatacattatattttgatgatgtttttctgttccctcaacccctccccacttttg 499
Query: 301 ttttttttttt----aagatttacttattttacttatatgagtacactgtagctgtcttc 356
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttttttttttttttaagatttacttattttacttatatgagtacactgtagctgtcttc 559
Query: 357 agacataccagaagagggcatcagatctcattacagatggttgtgagc 404
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agacataccagaagagggcatcagatctcattacagatggttgtgagc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 803
Length adjustment: 9
Effective length of query: 395
Effective length of database: 794
Effective search space: 313630
Effective search space used: 313630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_l02.g1 MSMg01no476_l02.g1 CHROMAT_FILE:
MSMg01no476_l02.g1 PHD_FILE: MSMg01no476_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:53 2005
(448 letters)
>mm_chr1_159617909_159618756
Length = 848
Score = 828 bits (428), Expect = 0.0
Identities = 443/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 1 tgtgagggggaacttggagggggggggcaacatttgggaagtaaataaataaaataatta 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgtgagggggaacttgga-agggggggcaacatttgggaagtaaataaataaaataatta 651
Query: 61 attagtaataaataaattaaatcatataaccaagccattaattccattaacaattacttt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 650 attagtaataaataaattaaatcatataaccaagccattaattccactaacaattacttt 591
Query: 121 tggcttggcaacgtgagtttcgtatgtcctcctcctcactgaagtgccacaacctccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tggcttggcaacgtgagtttcgtatgtcctcctcctcactgaagtgccacaacctccctt 531
Query: 181 ctcacctggactcacagtgaacattaagtttcaatgcaccaaagtagtgttcatttagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctcacctggactcacagtgaacattaagtttcaatgcaccaaagtagtgttcatttagat 471
Query: 241 agatgctatttcgagccaaatatactcatttaaacatcaataagtccgacctccaactga 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agatgctacatcgagccaaatatactcatttaaacatcaataagtccgacctccaactga 411
Query: 301 gctcatttgtgcagaggtaggcaggatggatttgaggaacatcagggaaacctgctagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gctcatttgtgcagaggtaggcaggatggatttgaggaacatcagggaaacctgctagct 351
Query: 361 ttcagggtgctattaaagaggaggaagcaacaacctccaccaaccgtccctaaatgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttcagggtgctattaaagaggaggaagcaacaacctccaccaaccgtccctaaatgtgat 291
Query: 421 cactttcaatttgctcaattcagcaggt 448
||||||||||||||||||||||||||||
Sbjct: 290 cactttcaatttgctcaattcagcaggt 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
