Query= MSMg01no476_o10.b1 MSMg01no476_o10.b1 CHROMAT_FILE:
MSMg01no476_o10.b1 PHD_FILE: MSMg01no476_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:10 2005
(242 letters)
>mm_chr1_83066954_83067595
Length = 642
Score = 427 bits (221), Expect = e-124
Identities = 240/251 (95%), Gaps = 9/251 (3%)
Strand = Plus / Plus
Query: 1 acagagaaatcctgtctcaaaaaaaaaaaaa--------gaaataaatgtatttattttc 52
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 193 acagagaaatcctgtctcaaaaaaaaaaaaaaaaaaaaagaaataaatgtatttattttc 252
Query: 53 atatgataacgtactatatatgtaacagttacatagttaaatagttaaatgagatccaac 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atatgataacgtactatatatgtaacagttacatagttaaatagttaaatgagatccaac 312
Query: 113 ttaattgatgtggatagaggtctcagggctaatgagaaaataaaataaaatttggaagca 172
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 313 ttaattgatgtggatagaggtctcagggctaatgagaaaataaaataaaaattggaagca 372
Query: 173 taatatttatataatttgtttttctt-ctgagacagtgtttctctgtgtggccctggctg 231
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 373 taatatttatataatttgtttttttttctgagacagtgtttctctgtgtggccctggctg 432
Query: 232 tcctgggactc 242
|||||||||||
Sbjct: 433 tcctgggactc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_o10.g1 MSMg01no476_o10.g1 CHROMAT_FILE:
MSMg01no476_o10.g1 PHD_FILE: MSMg01no476_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:10 2005
(283 letters)
>mm_chr1_83221813_83222495
Length = 683
Score = 495 bits (256), Expect = e-144
Identities = 279/292 (95%), Gaps = 10/292 (3%)
Strand = Plus / Minus
Query: 1 actttttaaaggagcaaatatatctagtcatagagaccatggaagaactgcagtacagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actttttaaaggagcaaatatatctagtcatagagaccatggaagaactgcagtacagct 303
Query: 61 gagagcgcagggtggatagtatggaagcagtatacagaaaatagacagtgagcagatttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagagcgcagggtgaatagtatggaagcagtatacagaaaatagacagtgagcagatttt 243
Query: 121 acacacttggatgcaaaatgctatgcttttagccaggaatagctctgtctctgtcttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acacacttggatgcaaaatgctatgcttttagccaggaatagctctgtctctgtcttttc 183
Query: 181 tgtttctatctctgtttctgtctctgactctatctctatgatgtgtgtgtgtgtgtgtgt 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgtctctatctctgtttctgtctctgactctatctctatgatgtgtgtgtgtgtgtgtgt 123
Query: 241 gt---------tgt-tttgtctcctctctctctaactctccgtgtgtatgta 282
|| ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgtgtgtgtgtgtgtgtgtctcctctctctctaactctccgtgtgtatgta 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
