CCTGTTCCAGCCTATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCCAACTTTTACAGGCCGAGGAAAAAAGAACATGAA
AAGGAAAGGGTAGGGAAGTGAAAAGAAATCCAGAAGGCCTAAAAACCAGG
AAGAACCAAGGCAAAGAAAGATCAGCTGTGCCAGATGGTGCTAAGAGAGC
CAAAGCGAGGACTCAGGACTATAAGATCAGCTTGAGGTCATTAATCTCAG
CACAGGAGCAGAGGCAGGCATATCTGAATGACTTCAAAGCTAGCCTGGTC
TACATAGTAAGTTCCAGGCCAGCTAGGACTACATATAAGACCCTGATGTA
GGGATTTAAATAGAATGGGTGAAACTTGTTGTGGAATAGCTATGGGAAGA
GGCAGGGATATACATTCAAGATGACTCAAAAAGAAGCCAAAATAAAAATG
GCAAAGGCATTTTAAGTTCCTTGCCTCCTTTCCCCCCTACGAATTCAAGT
CAAAATGAAAAATACCATGTCTAGGGAGCAGGATGGATTGAGAGGATATT
TCCAACAGTCTGGGCTTTCTCTTGCTTGTAGAGAAAAGTACCATGCAGAT
CTCTGCAAATCTTTTGGGAGCTCCATCTCACAGAATCAAGTGTTATAAAA
GAGTTTGATGTGAGCATGGAGTCAGCTTCTTTCATATCTAGCTGGTGACG
TGGGAGGCAATGAAACCACAGACAACATAAT

NNCCAACACAGAAGGGGGGGTGAAGGAGAGAGAAAAAAAGGANTTTTTAT
GGAGGGGGGGGGGCGCCCAGAGGNGGGGAAGATTTACTCAGAGGAGGCAG
AGTAAAAGAAANAAAAANNAAAAAAAAAGAGAGCGTNNNNNNNNNNGGGG
GGGTGTTGGGNGGNNNAANANNNNNNNNCGGCCAAAAAAGGTAAACTAGA
GGTGTGGGGGNTTTGAGGGGCTCCCTTTGGGGNNCGGGGGNNCCCCGGGN
CCCCTTTTTTTTTCTTCGAAAAAAGAAAAAGGGGGGGNGNNAAAAGGGGN
GGGGAAAACCAACCCNAAAAANAAGGNNNATATTTTTTTCCTCTCCTCCA
CGGGAAGGGGGGGGGAAGAGTGTTTTCCTTTTTTTTCCCTTTTTTTGGGG
GAAAAAAAGGGGAAAAAGGGTTCCCCTTTCCTCAAAAAAAGGCCCCAAAA
AAAAAAAAGGGGGTTTTTGGGGGGGGGGGNAAACCTTTTAAGAGGTCTCA
AAAAGGGTGTTTAAAAGGGGGGGGGGGGGCTTTTTTAACACAGAGGGGTG
GGGTGGGGGGGGAAAAAAGGGAAAAAAAAAGGGGGGGGGTTCTTTCCTCT
TTTAAAAAAAAAAAAAGGGGGTTTTTTTCCTCTCTTTGGGGGGGGGGCCC
CCTCTTTTTTTTNNNGGGGGGGAAGGGGGGGAGAGAGGGAGGGGGGGGAG
ATTTTTCCTTCTTTGGGAAGAAAAAGAGATATTTTTATTTCCCCCACCCC
CCCCCTCTCAAGAAAGAGAGGGGGGTGGGGAAGAACACCCCCTCCTCTTT
TCTTTTGGGGGGGGGGGGGGAGAAAAATAAAAAAATAAAAAATCCCTTTT
GTGGGGGGGGGGGGGGGGGGGGTGTGTTATTTTCAAACACAAAAAATAAA
AATAACTTTTTTCTTTTGTGGTGGGGGGGCGGGCGCCATCCGACACATAA
AAAAT

Query= MSMg01no477_m01.b1 MSMg01no477_m01.b1 CHROMAT_FILE:
MSMg01no477_m01.b1 PHD_FILE: MSMg01no477_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:17 2005
         (655 letters)



>mm_chr1_161879264_161880318
          Length = 1055

 Score = 1166 bits (603), Expect = 0.0
 Identities = 642/655 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggccgaggaaaaaagaacatgaaaaggaaagggtagggaagtgaaaagaaatccagaag 60
           ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aggccaaggaaaaaagaacatgaaaaggaaagggtagggaagtgagaagaaatccagaag 260

                                                                       
Query: 61  gcctaaaaaccaggaagaaccaaggcaaagaaagatcagctgtgccagatggtgctaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctaaaaaccaggaagaaccaaggcaaagaaagatcagctgtgccagatggtgctaaga 320

                                                                       
Query: 121 gagccaaagcgaggactcaggactataagatcagcttgaggtcattaatctcagcacagg 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gagccaaagcgaggactcaggactatacgatcagcttgaggtcattaatctcagcacagg 380

                                                                       
Query: 181 agcagaggcaggcatatctgaatgacttcaaagctagcctggtctacatagtaagttcca 240
           ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 381 agcagaggcaggcatatctgaatgagttcaaggctagcctggtctacatagtaagttcca 440

                                                                       
Query: 241 ggccagctaggactacatataagaccctgatgtagggatttaaatagaatgggtgaaact 300
           |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 441 ggccagctaggactacgtataagaccctgatgcagggatttaaatagaatgggtaaaact 500

                                                                       
Query: 301 tgttgtggaatagctatgggaagaggcagggatatacattcaagatgactcaaaaagaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttgtggaatagctatgggaagaggcagggatatacattcaagatgactcaaaaagaag 560

                                                                       
Query: 361 ccaaaataaaaatggcaaaggcattttaagttccttgcctcctttcccccctacgaattc 420
           |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaaaacaaaaatggtaaaggcattttaagttccttgcctcctttcccccctacgaattc 620

                                                                       
Query: 421 aagtcaaaatgaaaaataccatgtctagggagcaggatggattgagaggatatttccaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtcaaaatgaaaaataccatgtctagggagcaggatggattgagaggatatttccaac 680

                                                                       
Query: 481 agtctgggctttctcttgcttgtagagaaaagtaccatgcagatctctgcaaatcttttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtctgggctttctcttgcttgtagagaaaagtaccatgcagatctctgcaaatcttttg 740

                                                                       
Query: 541 ggagctccatctcacagaatcaagtgttataaaagagtttgatgtgagcatggagtcagc 600
           ||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||
Sbjct: 741 ggagctccatctcacagaatctagtattataagagagtttgatgtgagcatggagtcagc 800

                                                                  
Query: 601 ttctttcatatctagctggtgacgtgggaggcaatgaaaccacagacaacataat 655
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttctttcatatctagctggtgacgtgggaggcaatgaaaccacagacaacataat 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)