Query= MSMg01no478_b06.b1 MSMg01no478_b06.b1 CHROMAT_FILE:
MSMg01no478_b06.b1 PHD_FILE: MSMg01no478_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:42 2005
(220 letters)
>mm_chr1_175760883_175761501
Length = 619
Score = 410 bits (212), Expect = e-119
Identities = 218/220 (99%), Gaps = 1/220 (0%)
Strand = Plus / Minus
Query: 1 aacctctttgagctcaacacgtggtttataaatgtggcagcttcatggttctttagtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aacctctttgagctcaacacgtggtttataaatgtggcagcttcatggttctttagtctg 360
Query: 61 tccatttttaaagctgctcttttaaaactccattgcttgatagaacaccctttacggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tccatttttaaagctgctcttttaaaactccattgcttgatagaacaccctttacggact 300
Query: 121 atgcatatgaacacagttggaaangttcatgagcaataccttaagtaatgttcaataatg 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 299 atgcatatgaacacagttggaaa-gttcatgagcaataccttaagtaatgttcaataagg 241
Query: 181 tgtacattggggacattgtcttacttggatgtaatactgt 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgtacattggggacattgtcttacttggatgtaatactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 619
Length adjustment: 9
Effective length of query: 211
Effective length of database: 610
Effective search space: 128710
Effective search space used: 128710
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no478_b06.g1 MSMg01no478_b06.g1 CHROMAT_FILE:
MSMg01no478_b06.g1 PHD_FILE: MSMg01no478_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:42 2005
(655 letters)
>mm_chr1_175588405_175589459
Length = 1055
Score = 1266 bits (655), Expect = 0.0
Identities = 655/655 (100%)
Strand = Plus / Plus
Query: 1 agtgggtaactattgccaccaagaactgaatatatttcctgcagagaagaacatatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgggtaactattgccaccaagaactgaatatatttcctgcagagaagaacatatgcag 260
Query: 61 tacaggtactttcagtttaattacttcctaaaccattctcctacttattaataattctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaggtactttcagtttaattacttcctaaaccattctcctacttattaataattctcc 320
Query: 121 aagcctgaaaataacctgagaaggatattacacacatgcacatctactcatgaataaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcctgaaaataacctgagaaggatattacacacatgcacatctactcatgaataaatg 380
Query: 181 ggaaggagtttggaattagatgcctgctggatgagagctaaactgctttcctttagcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaggagtttggaattagatgcctgctggatgagagctaaactgctttcctttagcagt 440
Query: 241 ttagtgatttagcagttggtgaataagttattgcttccttagcatttctgaactatttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagtgatttagcagttggtgaataagttattgcttccttagcatttctgaactatttat 500
Query: 301 ggatatttatgaatggataagcccagttggtacagtatgcctatgcaatgataacctgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatatttatgaatggataagcccagttggtacagtatgcctatgcaatgataacctgga 560
Query: 361 agccttgacagctgtggcagagctcttaggtcttagtcacatcagggacctgaagtgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccttgacagctgtggcagagctcttaggtcttagtcacatcagggacctgaagtgacc 620
Query: 421 tttgtccaacatagtttttctctgaaggagaaggaagactatctggtgtttcatgtaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgtccaacatagtttttctctgaaggagaaggaagactatctggtgtttcatgtaatt 680
Query: 481 tgagatacaaaacaaatgacaccagatggtgggtctacaagaaggatcatattcttgtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagatacaaaacaaatgacaccagatggtgggtctacaagaaggatcatattcttgtgg 740
Query: 541 tgttactgttaggctgcttagggtcaatgctttacgtgcatggccacatgggcatacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttactgttaggctgcttagggtcaatgctttacgtgcatggccacatgggcatacaag 800
Query: 601 aaatttttttctaaaagctggtctttggcagctcttgtaccttctgcttttgaca 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatttttttctaaaagctggtctttggcagctcttgtaccttctgcttttgaca 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
