Query= MSMg01no478_e07.b1 MSMg01no478_e07.b1 CHROMAT_FILE:
MSMg01no478_e07.b1 PHD_FILE: MSMg01no478_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:57 2005
(386 letters)
>mm_chr1_93972949_93973734
Length = 786
Score = 739 bits (382), Expect = 0.0
Identities = 385/386 (99%)
Strand = Plus / Plus
Query: 1 cagcacttctacctttgcaaccctagctaggcaggacatgcctcagagctaggcccaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagcacttctacctttgcaaccctagctaggcaggacatgcctcagagctaggcccaagc 260
Query: 61 atggctgctgctagaagaagtgaggcagggaaaggaagtcaagcctcagcccagtggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggctgctgctagaagaagtgaggcagggaaaggaagtcaagcctcagcccagtggctt 320
Query: 121 atagataacactgcaaataatgtgttctagaacaatagttctcaaccttcctaacgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagataacactgcaaataatgtgttctagaacaatagttctcaaccttcctaacgctgc 380
Query: 181 gaccctttaaaacagttcaccatgttgtagtgacctccaaccacaaaatcattttcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccctttaaaacagttcaccatgttgtagtgacctccaaccacaaaatcattttcattg 440
Query: 241 ctactgcataactgtaattttgttactgttaggaagcttaatgtaaatatctggtatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactgcataactgtaattttgttactgttaggaagcttaatgtaaatatctggtatttc 500
Query: 301 caatggtcttaggcaattcctgtgaaatggtttttcaacactgccccctaaaggggttgc 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 caatggtcttaggcaattcctgtgaaagggtttttcaacactgccccctaaaggggttgc 560
Query: 361 aacccacaggttgagaactgctgttc 386
||||||||||||||||||||||||||
Sbjct: 561 aacccacaggttgagaactgctgttc 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_e07.g1 MSMg01no478_e07.g1 CHROMAT_FILE:
MSMg01no478_e07.g1 PHD_FILE: MSMg01no478_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:57 2005
(607 letters)
>mm_chr1_94125100_94126106
Length = 1007
Score = 1062 bits (549), Expect = 0.0
Identities = 591/607 (97%), Gaps = 4/607 (0%)
Strand = Plus / Minus
Query: 1 taacccctcttggttgggagagattctccttgtggaactaaaaacaggcctgcatgccca 60
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 732 taacccttcttggttgg----gattctccttgtggaactaaaaacaggcctgcatgccca 677
Query: 61 gggttaccaggataccacacgacatactctctcagacccacttccttcctcttcatccct 120
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 676 gggttaccaggataccacacgacataccctctcacccccacttccttcctcttcatccct 617
Query: 121 ggagagcctaatacctgtccacacccaggaaacttcggtgagcctccctggttttcccct 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 616 ggagagcctaatacctgtccacacccagaaaacttcggtgagcctccctggttttcccct 557
Query: 181 cagttctgggatttcatggcttatgactggtttgtggtacattccacactgttttcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cagttctgggatttcatggcttatgactggtttgtggtacattccacactgttttcttca 497
Query: 241 tttattttcttccagcacagagcacttcctcaagacagacagccttctccacaactggga 300
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccaccctcttccagcacagagcacttcctcaagacagacagccttctccacaactggga 437
Query: 301 gcagcgtagcttggggcacagaacacatcaaaccatgcatcatcggacttgagctttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 436 gcagcgtagcttggggcacagaacacatcaaaccatgcatcatcggactcgagctttgag 377
Query: 361 cctgggatctttaagtttctcctaaacctaaagatattgtggaaccttgtggctctgggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctgggatctttaagtttctcctaaacctaaagatattgtggaaccttgtggctctgggg 317
Query: 421 tagggagtaggctgccctttggaaggcacgtggatacccataacaatctcctatggttct 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 316 tagggagtaggctgccctttgggaggcacgtggatacccataacaatctcctatggttct 257
Query: 481 gatacagctcaccctgtgctaggtctcacacacaccatacacatatatacatgacacgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gatacagctcaccctgtgctaggtctcacacacaccatacacatatatacatgacacgtg 197
Query: 541 tatatgtatacatacacacaaacacatactaggaacactacacataacacacatatgtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tatatgtatacatacacacaaacacatactaggaacactacacataacacacatatgtac 137
Query: 601 atactta 607
|||||||
Sbjct: 136 atactta 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
