Query= MSMg01no478_g09.b1 MSMg01no478_g09.b1 CHROMAT_FILE:
MSMg01no478_g09.b1 PHD_FILE: MSMg01no478_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:07 2005
(612 letters)
>mm_chr1_97179599_97180611
Length = 1013
Score = 1112 bits (575), Expect = 0.0
Identities = 604/614 (98%), Gaps = 2/614 (0%)
Strand = Plus / Minus
Query: 1 atcagaattgacaacaagtgcaattaccattaagtcactgcactggcctgagaatttaaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atcagaattggcaacaagtgcaattaccattaagtcactgcactggcctgagaatttaaa 661
Query: 61 acctaaccagtagccatatattgtccacagaagacatcttatcctcattgttgtatgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 acctaaccagtagccatatattgtccacagaagacatcttatcctcattgttgtatgctt 601
Query: 121 acttatattagtcccttcctcaaaaggttagtttataggtaggataaagattgtcactga 180
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acttagaccagtcccttcctcaaaaggttagtttataggtaggataaagattgtcactga 541
Query: 181 agttaaaggataa-tccatttagttagctgtggtcttctgaaagaattccttcttgctgc 239
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agttaaaggaaaagtccatttagttagctgtggtcttctgaaagaattccttcttgctgc 481
Query: 240 aaatgtcattttagagacaattgtttgtcctctgtgactgcttgtgtttgggaggtccac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aaatgtcattttagagacaattgtttgtcctctgtgactgcttgtgtttgggaggtccac 421
Query: 300 acaggaagatgagttggatggatttaccgaagacatattggaaccattaggagcaagaga 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acaggaagatgagttggatggatttaccgaagacatattggaaccattaggagcaagagg 361
Query: 360 gaagaatccaccaggggcagtgcaaaggctgtaaacaaacagcaaagtatgattatcctg 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 360 gaagaatccaccaggggcagtgcaaaagctgtaaacaaacagcaaagtatgattatcctg 301
Query: 420 ttggcatctgtgtgctgccaaaccaaccctgaaatgctcctgggttaggccgtaggtaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttggcatctgtgtgctgccaaaccaaccctgaaatgctcctgggttaggccgtaggtaca 241
Query: 480 aagtgactgcactacaaagtttaagtaatcctttgggttgttgttgttgtt-ttgttttg 538
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 aagtgactgcactacaaagtttaagtaatcctttgggttgttgttgttgttgttgttttg 181
Query: 539 ntttgtttttctctctttaattgggaacatattttcccttcacatatggactgattccat 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttttgtttttctctctttaattgggaacatattttcccttcacatatggactgattccat 121
Query: 599 ttcctcctcccact 612
||||||||||||||
Sbjct: 120 ttcctcctcccact 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_g09.g1 MSMg01no478_g09.g1 CHROMAT_FILE:
MSMg01no478_g09.g1 PHD_FILE: MSMg01no478_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:07 2005
(414 letters)
>mm_chr1_96999878_97000691
Length = 814
Score = 793 bits (410), Expect = 0.0
Identities = 413/414 (99%)
Strand = Plus / Plus
Query: 1 actctgaaaacaggagccaaaataaaccctttcccttaagttgtttttcatcaaggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgaaaacaggagccaaaataaaccctttcccttaagttgtttttcatcaaggattt 260
Query: 61 gactctagcaacataaaataactaataaatcttatatgaaaataagcatcctttatagac 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactctagcaacataaaataaccaataaatcttatatgaaaataagcatcctttatagac 320
Query: 121 aagaggactcaaatgtcaagaaaaattgaatacatatagtcagcattttgacactatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaggactcaaatgtcaagaaaaattgaatacatatagtcagcattttgacactatttt 380
Query: 181 cctttaaaaagaaatacagtcatatgagtgattcaaaaccctactattttgtacatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttaaaaagaaatacagtcatatgagtgattcaaaaccctactattttgtacatggaa 440
Query: 241 tttttgtgaaagaaatatcagggcttatagtaaatttaacaaaaaataaattaagtttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttgtgaaagaaatatcagggcttatagtaaatttaacaaaaaataaattaagtttct 500
Query: 301 atcatgagaatgccaccttcatggagtcactttaaaccatagtcaattgatcagtcatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcatgagaatgccaccttcatggagtcactttaaaccatagtcaattgatcagtcatga 560
Query: 361 ttcatgtcatgaatgaagttaatacttgaaaaaaaaagaatattggcaaaggtt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcatgtcatgaatgaagttaatacttgaaaaaaaaagaatattggcaaaggtt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
