Query= MSMg01no481_l17.b1 MSMg01no481_l17.b1 CHROMAT_FILE:
MSMg01no481_l17.b1 PHD_FILE: MSMg01no481_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:28 2005
(339 letters)
>mm_chr1_190055010_190055746
Length = 737
Score = 485 bits (251), Expect = e-141
Identities = 274/285 (96%), Gaps = 7/285 (2%)
Strand = Plus / Minus
Query: 1 ttgggctgccctcactttccactcagtccctataaggaattgggcagactctgtccattt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 330 ttggactgccctcactttccactcagtccctataaggaattgggcagactc--tccattt 273
Query: 61 ctttaggtctccattgcccatgactgagaaaaacagcctttttatttagactaaaagggg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 ctttaggtctccattgcccatgactgagaaaaagagcctttttatttagactaaaagggg 213
Query: 121 aaatggtgggctttgtcctgatgctgtttgtattctgatgtcaattctgcttcctcaaga 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 212 aaatggtgggctttgtcctgatgctgtttgtattctgctgtcaattctgcttcctcaaga 153
Query: 181 ggggttgtcccaactagaagtcaaccatgtactcaggtgatctcatgtgaac-----ctt 235
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 152 ggggttgtcccaactagaagtcaaccatgtactcaggtgatctcatgtgaacattctctt 93
Query: 236 ctcatctttttaactggtctacaaaggctagagcctgtgattggg 280
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 92 ctcatctttttaactggtcaacaaaggctagagcctgtgattggg 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 737
Length adjustment: 9
Effective length of query: 330
Effective length of database: 728
Effective search space: 240240
Effective search space used: 240240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_l17.g1 MSMg01no481_l17.g1 CHROMAT_FILE:
MSMg01no481_l17.g1 PHD_FILE: MSMg01no481_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:28 2005
(239 letters)
>mm_chr1_189939009_189939647
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Plus
Query: 1 cagtcaaggatggcattacaatagatgcccgagatgtttctcccccacaaacatacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcaaggatggcattacaatagatgcccgagatgtttctcccccacaaacatacttct 260
Query: 61 gtgtggtagatgacaaatgatgctattgtcttgctgaggctgaaaagttaagaatacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtggtagatgacaaatgatgctattgtcttgctgaggctgaaaagttaagaatacttt 320
Query: 121 tcagatcctagaacaacaggtaaggatgttaggtgttgttagccaaggataatcatgtaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tcagatcctagaacaacaggtaaggatgttaggtgttgtaagccaaggataatcatgtaa 380
Query: 181 agagagtagttatcagggatcacaggctatcagcaacagattatcagatggagacagtg 239
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 agagagtagttatcaggcatcacaggctatcatcaacagattatcagatggagacagtg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
