NNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAACTTACGAACACTGAATGGCTGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACATCAGTCAGAATGGCTAAGATCAAAAATTCAGTTG
ACAGCAGATGTTGGCGAGGATGTGGAGAAAGAGGAACACTCTTCCAATGT
TGGTGGGACTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGCGATT
CCTCAGAAAATTGGACATAGTACTACCGGAAGATCCAGCAATTCCTTTCC
TGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACACACTCC
ACTATGTTCATAACGGTCTTATTTATAATAGCCAGAAGCTGGAAAGAATC
CAGATATCCCTCAACAGAGGAATGGATACAGAAAATGTGGCACATTTACA
CAATGGAGTACTACTCAGCAATTAAAAGCAATGAATTCATGAAATTCTTA
GGCAATTGGATACATCTGGAGGATATCATCCTGAGTGAGGTAACCCAAAC
ACAAAAGAACATACATGATATGCACTCACTGATAAGCATATATTAGCCTA
GAAACTTAGAATATCCAAGATACAATTTGCAAAACACATGAAACTCAAGA
ATAAGGAAAACCAAAGTGTGGATAGTTAGCTACTTTTTAGAATGAGGAAC
A

NNNNNNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGATGTGGGCCTGGAAA
TAAACAATATTATGCTGGTTGAAGAAGGTATTAAGATTTTATACTACTTG
ATAGAAAAGATTCATATTTGGTATTCTCATAAGCATCAGTGTAGCTACGT
TTGTTGAAACCAAAGAGAAAGTGGGAGCTGCAGAAGAGTAGCAGGCTTTA
GTGATCACCTCCATGTCCACAGAAAGCTCAAGAGAAAGGGTAGCCTCTGT
CTGGGGGGAAGATCAGCACTTGGAGAGTCAACAACCTAACAGTTTAGGGT
TTACTTTAAGTCAGTTTTGTGGGAGTTGTGAAGTCTTTGTGTACTTAATC
TCATACTCATAGGCAGTGGGATAACATCTGGCAATATCACACATTTCCTG
CCTGAGTTTCCTTTGATCCTTTGTTTAAAATTTAACCCTAAACCTGAACC
CTAACCCTGATCTCTGAATCCTGGAATTCTGACTCCTGATCCCTGACCCT
GACCCTAACATTGATTTCCACGGAATTTATTTCAATTCACTGGTCAAGGT
TACAGTCTATAATTTCATGGAAGTTACTGAAACGAGAGCTTTAAACAGTT
GACCACATTGCATTCATAGTAACAATGCATTGACTGAAGAATTGTTAAAC
CAGGCTTGCCTATTCTTAGGTTGGATTCTTTATTATATACAACTTANGN

Query= MSMg01no483_a08.g1 MSMg01no483_a08.g1 CHROMAT_FILE:
MSMg01no483_a08.g1 PHD_FILE: MSMg01no483_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:04 2005
         (625 letters)



>mm_chr1_197047953_197048977
          Length = 1025

 Score = 1135 bits (587), Expect = 0.0
 Identities = 596/599 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatgtgggcctggaaataaacaatattatgctggttgaagaaggtattaagattttata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 599 agatgtgggcctggaaataaacaatattatgctggttgaagaaggtattgagattttata 540

                                                                       
Query: 61  ctacttgatagaaaagattcatatttggtattctcataagcatcagtgtagctacgtttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctacttgatagaaaagattcatatttggtattctcataagcatcagtgtagctacgtttg 480

                                                                       
Query: 121 ttgaaaccaaagagaaagtgggagctgcagaagagtagcaggctttagtgatcacctcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttgaaaccaaagagaaagtgggagctgcagaagagtagcaggctttagtgatcacctcca 420

                                                                       
Query: 181 tgtccacagaaagctcaagagaaagggtagcctctgtctggggggaagatcagcacttgg 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 419 tgtccacagaaagctcaagagaaagggtagcctctgtctgggggaaagatcagcacttgg 360

                                                                       
Query: 241 agagtcaacaacctaacagtttagggtttactttaagtcagttttgtgggagttgtgaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agagtcaacaacctaacagtttagggtttactttaagtcagttttgtgggagttgtgaag 300

                                                                       
Query: 301 tctttgtgtacttaatctcatactcataggcagtgggataacatctggcaatatcacaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tctttgtgtacttaatctcatactcataggcagtgggataacatctggcaatatcacaca 240

                                                                       
Query: 361 tttcctgcctgagtttcctttgatcctttgtttaaaatttaaccctaaacctgaacccta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttcctgcctgagtttcctttgatcctttgtttaaaatttaaccctaaacctgaacccta 180

                                                                       
Query: 421 accctgatctctgaatcctggaattctgactcctgatccctgaccctgaccctaacattg 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 179 accctgatctctgaatcctggaattctgactcctgatccctgaccctaaccctaacattg 120

                                                                       
Query: 481 atttccacggaatttatttcaattcactggtcaaggttacagtctataatttcatggaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atttccacggaatttatttcaattcactggtcaaggttacagtctataatttcatggaag 60

                                                                      
Query: 541 ttactgaaacgagagctttaaacagttgaccacattgcattcatagtaacaatgcattg 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  ttactgaaacgagagctttaaacagttgaccacattgcattcatagtaacaatgcattg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)