TTTTNAACCTTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAA
TCCGCGGAATTCAAGTACAATGTTCAAAAGGTAGGGAGAGAGTGGACAGC
CTTGACTAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCACCATTT
ACTTTGATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTATCATGGTTAG
GTATGGTCCTTGAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGT
GTTGGATTTTGTCAAATGCTTTCTCAGCATCTTATGAGATGATCATGGGG
TTTTTGTCTTTGAGTTTGTTTATATACTGGATTACATTGATGGATTTCCG
AATATTGAACCATCCTTGCATCCCTGGGATGAAACCTACTTGGTCAGGAT
GGATGATTGTTTTGATGTGTCCTTGAATTCGGTTAGCGAGAACTTTATTG
AGGATTTTTGCATCTATATTCATAAGGGAAATGGTCTGAAGTTCTCTATC
TTTGTTGGGTCTTTTTGTGGTTTAGGTATCAGAGTAATTGTAGCTTCTAC
CTGAGTTGGGTAGAGAACCTTCTGTTTCTATTTTGTGGAATAGTTTGTGA
AGAACTGGGATTAGATCATCTTTGAATGTCTGATTGAACTCTGCACTAAA
CCCATCTGGTCCTGGGCTTTTTTTGGTTAGGAGACTATTAATGACTGCTT
CTATTTCTCTAGGGGATATGGGACTGTTTAA

NNNNNAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAAGTCCATATAGAAAC
TACCAGAAGAGTAGAATGAGGGGAGGGTAAAGGAGGGAGAAGTGAATTTC
TTCTGTTATAGGCAGCAAGGATGGAGGATAGCTTGAGGAAAGAGAAGCTA
TGCAGAATTTGTCTTAAGGTTTGGAAAAGTGTTTAAGATTTTGTTTTTAT
TCTCCTGTCCTTCAATGTCTCTCTTTAATTCTTACATTGCTTCCAAAATT
CTCATGTCCACGTCCTGTAAGTTAGCAATTTTGTCATTTCTTCTCTTAGA
AACACTTCTAAATTCTAATAAAGCAGACTGCCCACTGATTTGTTTGTTTT
ATTGCATAGATCTTCTAGTTTTACACATAAAATTACTAATTTTTGAATAT
CAATAATTTTCCATTGAGAGAACCATTAAGCCAAGCTATCTTTCAGTGTG
TAAATCTCTCTATTTTCCAAAATGCTTTCAAATGTTAAAATTGTGTAACT
ATTATATATAAAACCCGAAGTGCCAGATGGCATTATCTCTACACACAACC
TATCTTCTTCTGTTTGAAAACCTCCTCTTCCCCTTTATGTCCCCCCTTCC
TCATCTTTCCTCCTTTTCTCTGTGTCTTCTCTCTCTTTTCTTTTTCATGA
AAATTCAAGTATTTTCTATGCTAGCTCAGAATATATGATTTGGATCAGG

Query= MSMg01no485_c22.g1 MSMg01no485_c22.g1 CHROMAT_FILE:
MSMg01no485_c22.g1 PHD_FILE: MSMg01no485_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:02 2005
         (594 letters)



>mm_chr1_7859250_7860243
          Length = 994

 Score = 1125 bits (582), Expect = 0.0
 Identities = 591/594 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaaagtccatatagaaactaccagaagagtagaatgaggggagggtaaaggagggagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaagtccatatagaaactaccagaagagtagaatgaggggagggtaaaggagggagaa 260

                                                                       
Query: 61  gtgaatttcttctgttataggcagcaaggatggaggatagcttgaggaaagagaagctat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgaatttcttctgttataggcagcaaggatggaggatagcttgaggaaagagaagctat 320

                                                                       
Query: 121 gcagaatttgtcttaaggtttggaaaagtgtttaagattttgtttttattctcctgtcct 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 gcagaatttgtcttaaggtttggaaaagtgtttaagattttctttttattctcctgtcct 380

                                                                       
Query: 181 tcaatgtctctctttaattcttacattgcttccaaaattctcatgtccacgtcctgtaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaatgtctctctttaattcttacattgcttccaaaattctcatgtccacgtcctgtaag 440

                                                                       
Query: 241 ttagcaattttgtcatttcttctcttagaaacacttctaaattctaataaagcagactgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagcaattttgtcatttcttctcttagaaacacttctaaattctaataaagcagactgc 500

                                                                       
Query: 301 ccactgatttgtttgttttattgcatagatcttctagttttacacataaaattactaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccactgatttgtttgttttattgcatagatcttctagttttacacataaaattactaatt 560

                                                                       
Query: 361 tttgaatatcaataattttccattgagagaaccattaagccaagctatctttcagtgtgt 420
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgaatatcaataattctccattgagagaaccattaagccaagctatctttcagtgtgt 620

                                                                       
Query: 421 aaatctctctattttccaaaatgctttcaaatgttaaaattgtgtaactattatatataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatctctctattttccaaaatgctttcaaatgttaaaattgtgtaactattatatataa 680

                                                                       
Query: 481 aacccgaagtgccagatggcattatctctacacacaacctatcttcttctgtttgaaaac 540
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacccgaagtaccagatggcattatctctacacacaacctatcttcttctgtttgaaaac 740

                                                                 
Query: 541 ctcctcttcccctttatgtccccccttcctcatctttcctccttttctctgtgt 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctcctcttcccctttatgtccccccttcctcatctttcctccttttctctgtgt 794


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)