TTCCGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
GCGCGGAATTCAACGAGTTTCACAGTGTCATCAGCGACAGGGGGCAGAGG
TGGACCAAAAAGAATGAAACGCTTAAAAGCAACCAGATCAGCAGGCACAA
GAGGGTTACCCAGGGGATGAAAAATAGGAAATAGCTCTGGGGACAAGCCT
GGGAGGGTGCAGGGAGCTGGCGTCCTCTTACCTGGCCTGCGGGAGAGCAT
TTTGCAGAGGGCCCAGGTCGTAGTGGGGGCTGCCCGCCTTGGAGGGCAGA
CCCTGCAATGCCGTCACTTGGTTGGCAGCAAGGAGCTGGCCTCGGAGCCC
ACAGTTGACAAACTTGCCATGTCAAGCCTGTCGGCGCGCGCGCGTGCTCC
GCAGCCCGGGCACCTAGGCTTTTGTTGTGTCGCACGCCTCCTGTCCCCAG
CTCGCGCCTGCCTCCCGGTGTCCCAGTGCAATCTGGGCCACAGGACCTTT
CTCCCCCGCTCCGCCTGGGGACAGCAGTGCCACTTCCCTGGGAATCTCGA
GCTAAAAAGATGCCCCCAAGCCGGTGGTAAGGCAGGCGCGGCAGCATAAG
CAGGCGCGCACTCCTATGGGTCCGCTCCGGCCCTTGGGTTCCCACCCCCT
ACCTCTCCCTCCCTGTCCCGTCCCCCATTCAGAAAGCTGCTCAAAATCCA
CCCCGGTCCAAATCCAGCCCCATCT

NNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGGGCTTCTGAGGCCC
CACTCCTCTGACAGGTTCTAATGTGCAGTCAATGGTTTCTGGGGAAGTAA
GACAGAAAAGCTTTCCTCAATGGCGTATCCACTGCTATGTTGCCTACATT
CCTGTGAATGACTTTTCATGTCTTAAGCCTTTGGATTCTAGGGAACTCAT
CAGAGAGGGGCAGATAAAGCAAACACAAACACAAGCCTTATTCTAGTTTT
ACTCTGTTGCTCTGATAAGACACTCTGAGCAGAAGCACTTCAGAGAAGGA
AAGATTTCTTAGGCTCCTACTTCTAGGTCACAGTCTACCATTGATGGAAG
TCAGGGCAGGAATCTCAAGCATAAACCATGGAGAAAGGCTGTTTGCTAGC
TAGCTTACAGGGTCATGATGAGCTAGCTTCTTACACAGTCCAGGGATCAT
CTGACAGGGAATGGTACCACCCAAAGTAAGCTGGCTCCTCTTGTGTAAAT
TTACAAGCTTATAGGTCCCCCCCCACCCCCACAGACATGCCCACAGGCCA
GTCTGACCCCTTAGGCAATTCCTCAGTCTAAGCTTTCAGATGGTTCGAGT
TCTGTCAAGTTGACAACCCGGAAGAACATCCTCGTTCTTCATTTGAGATC
TGGGCATGTTGTATTGAGAGCAGCACCAGGTGTCCCCAT

Query= MSMg01no485_f09.b1 MSMg01no485_f09.b1 CHROMAT_FILE:
MSMg01no485_f09.b1 PHD_FILE: MSMg01no485_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:15 2005
         (481 letters)



>mm_chr1_128388772_128389652
          Length = 881

 Score =  915 bits (473), Expect = 0.0
 Identities = 479/481 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catcagcgacagggggcagaggtggaccaaaaagaatgaaacgcttaaaagcaaccagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcagcgacagggggcagaggtggaccaaaaagaatgaaacgcttaaaagcaaccagat 260

                                                                       
Query: 61  cagcaggcacaagagggttacccaggggatgaaaaataggaaatagctctggggacaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcaggcacaagagggttacccaggggatgaaaaataggaaatagctctggggacaagc 320

                                                                       
Query: 121 ctgggagggtgcagggagctggcgtcctcttacctggcctgcgggagagcattttgcaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgggagggtgcagggagctggcgtcctcttacctggcctgcgggagagcattttgcaga 380

                                                                       
Query: 181 gggcccaggtcgtagtgggggctgcccgccttggagggcagaccctgcaatgccgtcact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcccaggtcgtagtgggggctgcccgccttggagggcagaccctgcaatgccgtcact 440

                                                                       
Query: 241 tggttggcagcaaggagctggcctcggagcccacagttgacaaacttgccatgtcaagcc 300
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggggggcagcaaggagctggcctcggagcccacagttgacaaacttgccatgtcaagcc 500

                                                                       
Query: 301 tgtcggcgcgcgcgcgtgctccgcagcccgggcacctaggcttttgttgtgtcgcacgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtcggcgcgcgcgcgtgctccgcagcccgggcacctaggcttttgttgtgtcgcacgcc 560

                                                                       
Query: 361 tcctgtccccagctcgcgcctgcctcccggtgtcccagtgcaatctgggccacaggacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctgtccccagctcgcgcctgcctcccggtgtcccagtgcaatctgggccacaggacct 620

                                                                       
Query: 421 ttctcccccgctccgcctggggacagcagtgccacttccctgggaatctcgagctaaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctcccccgctccgcctggggacagcagtgccacttccctgggaatctcgagctaaaaa 680

            
Query: 481 g 481
           |
Sbjct: 681 g 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)