TCTATTGTCAAAGACCCAATAACTCCAACATAACACATGTATCACTCACT
CTCCTTCGTGACTGCCCTATATTCAGCGTCCGCGCCTCTCCCCTACCTCT
ACCTGCGTGAGAGGCGCGCAGCCTCACTAACCTATAGCCACCACCACGCA
ACGGATGTTGCGGGCATTGGTGGTTATCACTTTTTTTAACGAGTCTAACA
TATTGGTTTGCGCCTGATTTTGCACGTGGGTTGTATCAGGAGAGGTTGGT
GTGGGCTAGTGAGGGGTCTAGGGCTCGGCTCACGAACGCCAGAGAGTGAA
GTGTGAAACACGTATTAAACAACGAAACCTAAGTTATCTAGCACCAGTTG
TCAGCATGACACTCTCGTCAATAATACAATTGATTGTAAGACTCTTATTA
CTAAAATTATTCGCCGAACAAGCGAGACACAGAGTGTCATACAACGAGCC
GAATAGTTTATCGTCTGCACAAAGTCCACATAATGACATCAATGACATCA
CAGATTCGTATACCACACTAGACATACCCCCACTACACATTTAATTGTGC
AATTGATAATGAACCAATTCGGGACATATGACCAACTACCGACTTAGTGA
CCCTGAACACACAACATCACTTTACAATATCATCATATCACAATCCCTAC
ATAGTAAAAAATAACACACTATATCCCCTACATCAGAGTAGATCGACACA
CTAAGTTTCACATAAGAGAATACACACTACCTAGACCCATAATACACTGT
CCATCCCGCGTGTATTGCCACCATGCAATAGGAGTGACATGCTCATTTAT
GGTATATCAACTCCACACATACTATACACAACAAATGTGCTAGAGTGACC
TGTGTAGTACATATCGATATAGGGCTATGACATGCCTACCACTGCACCGA
AGTGAACCTCACCCAACAAAATATTAAATTAGATACCGCACCTCTGCTGC
TCTCATCTATGAATCACCTGCATATAATTGCTACTCTTATATCACCACGC
CGCAGTCAGAGAGACACATTTGTCGNGTGATGTTACGCGAGACGTGTCAC
TGACGCCGAATTACGTTATCGAAGCACCATGATAAATGATATTCGTCCTC
ATCCGCATGGATGCTACGCTATAGTGATTATCGGGCGACAGTCAAATCGC
GATACCGATTTATAACCCAGAGAATTATATTATATAGTGAGCACGAACGC
GAGCGATACTACCG

GTGTTTTATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAGATAAGGGAAATG
GGTCATCTAAATCTTAGCCAGACTCAACTGCTGTAGACACTCGCTACTGC
AAATTCCCTTCAAGACTGAACTAGAAATAGACCCCAAGGGTTTGGGGCAG
TGTTGATATTTGATGATACCTTCACAGCAGCAGCTGCTGAAGCTGTGTGT
GCCTCAATAAAAATTTCTGTTTTAAATTCTTTTTCCTTCACATTTGCTGT
AGAAAATTGGATCCCAACAGCTTCAACCATACGGCAAGAAGGTGACTTCA
CATTCCGGTGGGAGAGCAGATGAGAGACAAGAGCCTTGTCACTAAGGCAC
CTTTAAAAAATGACTGTTAGAAGGAGAAAAATCTATCTTATTTTTAAATA
GTTCTCTGGCATCCAAAAGCAGTTAAAAGACAGATTGCCAGGATCATTAA
GGAAGCTGGAAAACAAAGCTTAGAGCAACAAAGGGAGACAGTGATTCCTC
TGAGAGAGAAACTGCCTGATTATCACAAGCTGTCGCAACTCAGCTGTATT
TTGGAACCCTGTGCTTCTCAGATCTGTGGAGATCCAGCCCTGCCCACAGC
TCATTATTAGACAGAAATACTTCGTGTCTGCACTTTAAATGAAAGGGGGA
AACACAAATGATATAAAGAATAAGAA

Query= MSMg01no485_j18.g1 MSMg01no485_j18.g1 CHROMAT_FILE:
MSMg01no485_j18.g1 PHD_FILE: MSMg01no485_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:37 2005
         (602 letters)



>mm_chr1_47093770_47094771
          Length = 1002

 Score = 1156 bits (598), Expect = 0.0
 Identities = 601/602 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attagataagggaaatgggtcatctaaatcttagccagactcaactgctgtagacactcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 attagataagggaaatgggtcatctaaatcttagccagactcaactgctgtagacactcg 743

                                                                       
Query: 61  ctactgcaaattcccttcaagactgaactagaaatagaccccaagggtttggggcagtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctactgcaaattcccttcaagactgaactagaaatagaccccaagggtttggggcagtgt 683

                                                                       
Query: 121 tgatatttgatgataccttcacagcagcagctgctgaagctgtgtgtgcctcaataaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgatatttgatgataccttcacagcagcagctgctgaagctgtgtgtgcctcaataaaaa 623

                                                                       
Query: 181 tttctgttttaaattctttttccttcacatttgctgtagaaaattggatcccaacagctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tttctgttttaaattctttttccttcacatttgctgtagaaaattggatcccaacagctt 563

                                                                       
Query: 241 caaccatacggcaagaaggtgacttcacattccggtgggagagcagatgagagacaagag 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 562 caaccatacggcaagaaggtgacttcacgttccggtgggagagcagatgagagacaagag 503

                                                                       
Query: 301 ccttgtcactaaggcacctttaaaaaatgactgttagaaggagaaaaatctatcttattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccttgtcactaaggcacctttaaaaaatgactgttagaaggagaaaaatctatcttattt 443

                                                                       
Query: 361 ttaaatagttctctggcatccaaaagcagttaaaagacagattgccaggatcattaagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaaatagttctctggcatccaaaagcagttaaaagacagattgccaggatcattaagga 383

                                                                       
Query: 421 agctggaaaacaaagcttagagcaacaaagggagacagtgattcctctgagagagaaact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agctggaaaacaaagcttagagcaacaaagggagacagtgattcctctgagagagaaact 323

                                                                       
Query: 481 gcctgattatcacaagctgtcgcaactcagctgtattttggaaccctgtgcttctcagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcctgattatcacaagctgtcgcaactcagctgtattttggaaccctgtgcttctcagat 263

                                                                       
Query: 541 ctgtggagatccagccctgcccacagctcattattagacagaaatacttcgtgtctgcac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgtggagatccagccctgcccacagctcattattagacagaaatacttcgtgtctgcac 203

             
Query: 601 tt 602
           ||
Sbjct: 202 tt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)