Query= MSMg01no485_o08.b1 MSMg01no485_o08.b1 CHROMAT_FILE:
MSMg01no485_o08.b1 PHD_FILE: MSMg01no485_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:01 2005
(460 letters)
>mm_chr1_77224246_77225105
Length = 860
Score = 632 bits (327), Expect = 0.0
Identities = 342/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 115 atgaccactttaaaagtggaaaaccttttcacagaggctacttaagaccatctacatatc 174
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 859 atgaccactttaaaagtcgaaaaccttttcacagaggctacttgagaccatctacatatc 800
Query: 175 agatatagacattaagattcataccagtagccaaattacagatgtgaagtagcagggaga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agatatagacattaagattcataccagtagccaaattacagatgtgaagtagcagggaga 740
Query: 235 ataattttatggttggggtcaccacaacaggaggaactgtgttaaagggttgcagcatta 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ataattttatggttggggtcaccacaacaggaggaactgtgttaaagggttgcagcatta 680
Query: 295 cgaagggtgggaaccgctgctttagagagagaagcttctgccctgggacagctcagttct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cgaagggtgggaaccgctgctttagagagagaagcttctgccctgggacagctcagttct 620
Query: 355 aataaggggagactgaggaacattcccaaaggagggcttcatttacgcggctgctccatc 414
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 619 aataaggggagactgaggaacattcccaaaggagggcttcatttacgtggctgctccatc 560
Query: 415 cctggcttacatccctttc-acaaaacactcaaaagagacactggct 460
|||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 559 cctggcttacatcc-tttccacaaaacactcaaaagagacactggct 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_o08.g1 MSMg01no485_o08.g1 CHROMAT_FILE:
MSMg01no485_o08.g1 PHD_FILE: MSMg01no485_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:01 2005
(530 letters)
>mm_chr1_77022202_77023131
Length = 930
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%)
Strand = Plus / Plus
Query: 243 attctttaaatcagcgcctgggctaccagaaaggcacggaactgcatgagaataacagac 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 443 attctttaaatcagcgcctgggctaccagaaaggcacggagctgcatgagaataacagac 502
Query: 303 attgctcaagagggaggtgggctttctgtgcatgaagcctttaccctagactttcacaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgctcaagagggaggtgggctttctgtgcatgaagcctttaccctagactttcacaag 562
Query: 363 aacccccagagcacttagctcaaggttcagggagtgtgggaggctttgggcagcaagaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aacccccagagcacttagctcaaggttcagggagtgtgggaggctttgggcagcaagaga 622
Query: 423 aagagacagcacaaggatgacctagaaaccacttgtcctctgtgattcagatgatgaggt 482
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 623 aagagacagcacgaggatgacctagaaaccacttgtcctctgcgattcagatgatgaggt 682
Query: 483 tagagaaaccaaggggtggaatgatctgctttgtgacaagctctggat 530
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tagagaaaccaaggggtggaatgatctgctttgtgacaagctctggat 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
