MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-486A04
Chromosome	1 (Build37)
Map Location	167,029,747 - 167,074,008
singlet/doublet	doublet
Overlap gene	Tbx19
Upstream gene	Selp, F5, Slc19a2, 4930455F23Rik, Blzf1, Nme7, Atp1b1, LOC100040065, Dpt, Xcl1, 1700029M03Rik
Downstream gene	Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Sacy, Ppia-ps1-1625, Mpzl1, Rcsd1, Creg1, Cd247, Pou2f1, LOC665409, Dusp27, Gpa33
Link	Open Mouse BAC browser

Click to get alignment info.

name	Selp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20344 MGI:98280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14067 MGI:88382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc19a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116914 MGI:1928761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930455F23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74895 MGI:1922145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Blzf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66352 MGI:1201607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nme7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171567 MGI:2449121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atp1b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11931 MGI:88108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Dpt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56429 MGI:1928392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xcl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16963 MGI:104593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700029M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69476 MGI:1916726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tbx19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83993 MGI:1891158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sft2d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108735 MGI:1917362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tiprl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226591 MGI:1915087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240888 MGI:2685054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqwd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74106 MGI:1921356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 1 Protein

name	Brp44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70456 MGI:1917706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sacy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271639 MGI:2660854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps1-1625 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606514
definition	note : peptidylprolyl isomerase A pseudogene 1_1625.1 pseudo : _no_value

name	Mpzl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68481 MGI:1915731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Rcsd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226594 MGI:2676394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Creg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433375 MGI:1344382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd247 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12503 MGI:88334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pou2f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18986 MGI:101898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC665409 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Dusp27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240892 MGI:2685055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpa33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59290 MGI:1891703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Selp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755455 GeneID:20344 MGI:98280
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selectin, platelet transcript_id : NM_011347.1

name	F5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185910 GeneID:14067 MGI:88382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor V transcript_id : NM_007976.2

name	Slc19a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131106 GeneID:116914 MGI:1928761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 19 (thiamine transporter), member 2 transcript_id : NM_054087.2

name	4930455F23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349880 GeneID:74895 MGI:1922145
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930455F23 gene transcript_id : NM_029115.2

name	Blzf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351393 GeneID:66352 MGI:1201607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic leucine zipper nuclear factor 1 transcript_id : NM_025505.3

name	Nme7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385592 GeneID:171567 MGI:2449121
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-metastatic cells 7, protein expressed in transcript_id : NM_178071.3

name	Nme7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803388 GeneID:171567 MGI:2449121
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-metastatic cells 7, protein expressed in transcript_id : NM_138314.2

name	Atp1b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387378 GeneID:11931 MGI:88108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Na+/K+ transporting, beta 1 polypeptide transcript_id : NM_009721.3

name	LOC100040065 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149245306 GeneID:100040065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040065 transcript_id : XM_001474339.1

name	Dpt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130574 GeneID:56429 MGI:1928392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dermatopontin transcript_id : NM_019759.2

name	Xcl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678711 GeneID:16963 MGI:104593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C motif) ligand 1 transcript_id : NM_008510.1

name	1700029M03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149245314 GeneID:69476 MGI:1916726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 1700029M03 gene transcript_id : XM_001474414.1

name	Tbx19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363972 GeneID:83993 MGI:1891158
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 19 transcript_id : NM_032005.3

name	Sft2d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802343 GeneID:108735 MGI:1917362
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SFT2 domain containing 2 transcript_id : NM_145512.3

name	Tiprl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801998 GeneID:226591 MGI:1915087
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TIP41, TOR signalling pathway regulator-like (S. cerevisiae) transcript_id : NM_145513.3

name	Gpr161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487462 GeneID:240888 MGI:2685054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 161 transcript_id : NM_001081126.1

name	Iqwd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149245318 GeneID:74106 MGI:1921356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 1 Protein product : IQ motif and WD repeats 1 transcript_id : XM_976438.2

name	Brp44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803058 GeneID:70456 MGI:1917706
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain protein 44 transcript_id : NM_027430.2

name	Sacy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801853 GeneID:271639 MGI:2660854
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : soluble adenylyl cyclase transcript_id : NM_173029.2

name	Mpzl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140970932 GeneID:68481 MGI:1915731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myelin protein zero-like 1 transcript_id : NM_001001880.2

name	Mpzl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140969904 GeneID:68481 MGI:1915731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myelin protein zero-like 1 transcript_id : NM_001083897.1

name	Rcsd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781792 GeneID:226594 MGI:2676394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RCSD domain containing 1 transcript_id : NM_001038846.1

name	Rcsd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781799 GeneID:226594 MGI:2676394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RCSD domain containing 1 transcript_id : NM_178593.3

name	Creg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542419 GeneID:433375 MGI:1344382
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cellular repressor of E1A-stimulated genes 1 transcript_id : NM_011804.2

name	Cd247 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13624302 GeneID:12503 MGI:88334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD247 antigen transcript_id : NM_031162.1

name	Pou2f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431253 GeneID:18986 MGI:101898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 2, transcription factor 1 transcript_id : NM_198932.2

name	Pou2f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431251 GeneID:18986 MGI:101898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 2, transcription factor 1 transcript_id : NM_011137.2

name	Pou2f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431255 GeneID:18986 MGI:101898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 2, transcription factor 1 transcript_id : NM_198933.2

name	Pou2f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431257 GeneID:18986 MGI:101898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 2, transcription factor 1 transcript_id : NM_198934.2

name	Dusp27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368935 GeneID:240892 MGI:2685055
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 27 (putative) transcript_id : NM_001033344.2

name	Gpa33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11037799 GeneID:59290 MGI:1891703
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein A33 (transmembrane) transcript_id : NM_021610.1

name	Selp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755456 GeneID:20344 MGI:98280
definition	GO_component : GO:0016020 - membrane [Evidence IDA] [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0031092 - platelet alpha granule membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IMP] codon_start : 1 note : P selectin product : selectin, platelet protein_id : NP_035477.1

name	F5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679731 GeneID:14067 MGI:88382
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : coagulation factor V protein_id : NP_032002.1

name	Slc19a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905117 CCDS:CCDS15433.1 GeneID:116914 MGI:1928761
definition	GO_component : GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0015234 - thiamin transporter activity [Evidence IDA] GO_process : GO:0015888 - thiamin transport [Evidence IDA] codon_start : 1 note : solute carrier family 19 (thiamine transproter), member 2 product : solute carrier family 19 (thiamine transporter), member 2 protein_id : NP_473428.1

name	4930455F23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794178 CCDS:CCDS15434.1 GeneID:74895 MGI:1922145
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74895 protein_id : NP_083391.1

name	Blzf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541835 CCDS:CCDS15435.1 GeneID:66352 MGI:1201607
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0007030 - Golgi organization and biogenesis [Evidence ISS]; GO:0043001 - Golgi to plasma membrane protein transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : basic leucine zipper nuclear factor 1-like product : basic leucine zipper nuclear factor 1 protein_id : NP_079781.2

name	Nme7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19923869 GeneID:171567 MGI:2449121
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006241 - CTP biosynthesis [Evidence IEA]; GO:0006183 - GTP biosynthesis [Evidence IEA]; GO:0009117 - nucleotide metabolism [Evidence IEA]; GO:0006228 - UTP biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; nucleoside-diphosphate kinase; nucleoside diphosphate kinase 7 product : non-metastatic cells 7, protein expressed in isoform 1 protein_id : NP_612187.1

name	Nme7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017377 CCDS:CCDS15436.1 GeneID:171567 MGI:2449121
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006241 - CTP biosynthesis [Evidence IEA]; GO:0006183 - GTP biosynthesis [Evidence IEA]; GO:0009117 - nucleotide metabolism [Evidence IEA]; GO:0006228 - UTP biosynthesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; nucleoside-diphosphate kinase; nucleoside diphosphate kinase 7 product : non-metastatic cells 7, protein expressed in isoform 2 protein_id : NP_835172.1

name	Atp1b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753138 GeneID:11931 MGI:88108
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0030955 - potassium ion binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0005391 - sodium:potassium-exchanging ATPase activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium/potassium ATPase beta subunit product : Na+/K+ -ATPase beta 1 subunit protein_id : NP_033851.1

name	LOC100040065 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149245307 GeneID:100040065
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474389.1

name	Dpt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789943 CCDS:CCDS15437.1 GeneID:56429 MGI:1928392
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : early quiescence protein-1 product : dermatopontin protein_id : NP_062733.1

name	Xcl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678712 CCDS:CCDS15438.1 GeneID:16963 MGI:104593
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : lymphotactin; small inducible cytokine subfamily C, member 1 (lymphotactin) product : chemokine (C motif) ligand 1 protein_id : NP_032536.1

name	1700029M03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149245315 GeneID:69476 MGI:1916726
definition	codon_start : 1 product : hypothetical protein LOC69476 protein_id : XP_001474464.1

name	Tbx19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030783 CCDS:CCDS15439.1 GeneID:83993 MGI:1891158
definition	GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045165 - cell fate commitment [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : T-box 19 protein_id : NP_114394.1

name	Sft2d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704008 CCDS:CCDS15440.1 GeneID:108735 MGI:1917362
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SFT2 domain containing 2 protein_id : NP_663487.1

name	Tiprl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704010 CCDS:CCDS15441.1 GeneID:226591 MGI:1915087
definition	codon_start : 1 product : TIP41, TOR signalling pathway regulator-like protein_id : NP_663488.1

name	Gpr161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487463 GeneID:240888 MGI:2685054
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 161 protein_id : NP_001074595.1

name	Iqwd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149245319 GeneID:74106 MGI:1921356
definition	codon_start : 1 note : overriding stop codons product : IQ motif and WD repeats 1 protein_id : XP_981532.2 transl_except : (pos:complement(167281286),aa:OTHER) transl_except : (pos:complement(167281215..167281216),aa:OTHER)

name	Brp44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312594 CCDS:CCDS15442.1 GeneID:70456 MGI:1917706
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 product : brain protein 44 protein_id : NP_081706.1

name	Sacy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370546 GeneID:271639 MGI:2660854
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0005488 - binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenylate cyclase 10; testicular soluble adenylyl cyclase product : soluble adenylyl cyclase protein_id : NP_766617.1

name	Mpzl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:140969905 GeneID:68481 MGI:1915731
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; protein zero-related product : myelin protein zero-like 1 isoform a protein_id : NP_001077366.1

name	Mpzl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457857 GeneID:68481 MGI:1915731
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; protein zero-related product : myelin protein zero-like 1 isoform b protein_id : NP_001001880.1

name	Rcsd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781793 GeneID:226594 MGI:2676394
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : RCSD domain containing 1 isoform b protein_id : NP_001033935.1

name	Rcsd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781800 GeneID:226594 MGI:2676394
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : RCSD domain containing 1 isoform a protein_id : NP_848708.2

name	Creg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753520 GeneID:433375 MGI:1344382
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0008134 - transcription factor binding [Evidence IDA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 product : cellular repressor of E1A-stimulated genes 1 protein_id : NP_035934.1

name	Cd247 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13624303 CCDS:CCDS15443.1 GeneID:12503 MGI:88334
definition	GO_component : GO:0042105 - alpha-beta T cell receptor complex [Evidence IDA]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0042101 - T cell receptor complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 note : CD3-zeta/eta product : CD3 antigen, zeta polypeptide protein_id : NP_112439.1

name	Pou2f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431254 GeneID:18986 MGI:101898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform Z is encoded by transcript variant 2; ubiquitous transcription factor product : POU domain, class 2, transcription factor 1 isoform Z protein_id : NP_945150.2

name	Pou2f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431252 GeneID:18986 MGI:101898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1; ubiquitous transcription factor product : POU domain, class 2, transcription factor 1 isoform A protein_id : NP_035267.2

name	Pou2f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431256 CCDS:CCDS15444.1 GeneID:18986 MGI:101898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform L is encoded by transcript variant 3; ubiquitous transcription factor product : POU domain, class 2, transcription factor 1 isoform L protein_id : NP_945151.2

name	Pou2f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431258 GeneID:18986 MGI:101898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence ISS] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 4; ubiquitous transcription factor product : POU domain, class 2, transcription factor 1 isoform B protein_id : NP_945152.2

name	Dusp27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370021 CCDS:CCDS15446.1 GeneID:240892 MGI:2685055
definition	GO_function : GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dual specificity phosphatase 27 (putative) protein_id : NP_001028516.1

name	Gpa33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11037800 CCDS:CCDS15447.1 GeneID:59290 MGI:1891703
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] codon_start : 1 note : A33 antigen product : glycoprotein A33 (transmembrane) protein_id : NP_067623.1

name	(CDS detail)
type	STS
link
xref	UniSTS:271722
definition	standard_name : PMC18721P2

name	(CDS detail)
type	STS
link
xref	UniSTS:178493
definition	standard_name : AI173222

name	(CDS detail)
type	STS
link
xref	UniSTS:224172
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225154
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128444
definition	standard_name : D1Mit108

name	(CDS detail)
type	STS
link
xref	UniSTS:178497
definition	standard_name : AW322295

name	(CDS detail)
type	STS
link
xref	UniSTS:178498
definition	standard_name : AI427889

name	(CDS detail)
type	STS
link
xref	UniSTS:128544
definition	standard_name : D1Mit203

name	(CDS detail)
type	STS
link
xref	UniSTS:207243
definition	standard_name : BB495310

name	(CDS detail)
type	STS
link
xref	UniSTS:234255
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225347
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:119714
definition	standard_name : RH94466

name	(CDS detail)
type	STS
link
xref	UniSTS:116689
definition	standard_name : D1Mit35

name	(CDS detail)
type	STS
link
xref	UniSTS:116688
definition	standard_name : D1Mit269

name	(CDS detail)
type	STS
link
xref	UniSTS:123173
definition	standard_name : 13.MMHAP57FRE7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165117
definition	standard_name : AI574175

name	(CDS detail)
type	STS
link
xref	UniSTS:178502
definition	standard_name : AI661682

name	(CDS detail)
type	STS
link
xref	UniSTS:163268
definition	standard_name : D43769

name	(CDS detail)
type	STS
link
xref	UniSTS:116690
definition	standard_name : D1Mit507

name	(CDS detail)
type	STS
link
xref	UniSTS:108989
definition	standard_name : G49233

name	(CDS detail)
type	STS
link
xref	UniSTS:210530
definition	standard_name : RH136548

name	(CDS detail)
type	STS
link
xref	UniSTS:167292
definition	standard_name : D1Ertd754e

name	(CDS detail)
type	STS
link
xref	UniSTS:165116
definition	standard_name : AI506168

name	(CDS detail)
type	STS
link
xref	UniSTS:128824
definition	standard_name : D1Mit453

name	(CDS detail)
type	STS
link
xref	UniSTS:128923
definition	standard_name : D1Mit63

name	(CDS detail)
type	STS
link
xref	UniSTS:92704
definition	standard_name : D1S2526

name	(CDS detail)
type	STS
link
xref	UniSTS:235276
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234256
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128907
definition	standard_name : D1Mit539.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128906
definition	standard_name : D1Mit539

name	(CDS detail)
type	STS
link
xref	UniSTS:142258
definition	standard_name : D1Mit539.2

name	(CDS detail)
type	STS
link
xref	UniSTS:165119
definition	standard_name : AI844869

name	(CDS detail)
type	STS
link
xref	UniSTS:158880
definition	standard_name : AA755314

name	(CDS detail)
type	STS
link
xref	UniSTS:128481
definition	standard_name : D1Mit144

name	(CDS detail)
type	STS
link
xref	UniSTS:124852
definition	standard_name : J03297

name	(CDS detail)
type	STS
link
xref	UniSTS:271854
definition	standard_name : PMC197251P5

name	(CDS detail)
type	STS
link
xref	UniSTS:178503
definition	standard_name : J04967

name	(CDS detail)
type	STS
link
xref	UniSTS:119905
definition	standard_name : RH94658

name	(CDS detail)
type	STS
link
xref	UniSTS:178499
definition	standard_name : AW552088

name	(CDS detail)
type	STS
link
xref	UniSTS:141281
definition	standard_name : Cd3z

name	(CDS detail)
type	STS
link
xref	UniSTS:163269
definition	standard_name : L03353

name	(CDS detail)
type	STS
link
xref	UniSTS:158879
definition	standard_name : X68362

name	(CDS detail)
type	STS
link
xref	UniSTS:108991
definition	standard_name : Pou2f1

name	(CDS detail)
type	STS
link
xref	UniSTS:273111
definition	standard_name : PMC321444P1

name	(CDS detail)
type	STS
link
xref	UniSTS:234259
definition

name	LOC665409 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245283 GeneID:665409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to RNA polymerase II transcription factor SIII p18 subunit pseudo : _no_value transcript_id : XR_031258.1

clone name	MSMg01-541L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265M02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534L01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-084O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-486A04.T7 (MSMg01no486_a04.b1)	MSMg01-486A04.TJ (MSMg01no486_a04.g1)
ACC	AG565315	AG565316
length	736	721
length of high quality (start - end)	507 (77 - 583)	637 (85 - 721)
definition	CHROMAT_FILE: MSMg01no486_a04.b1 PHD_FILE: MSMg01no486_a04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:08:11 2005	CHROMAT_FILE: MSMg01no486_a04.g1 PHD_FILE: MSMg01no486_a04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:08:11 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(167,073,503 - 167,074,008)	(167,029,747 - 167,030,179)
sequence	NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATGC GCGGAATTCCATGGCTCTTACCCGGCCGCAGGGGTCATTCATTCCCAGCA ATCCACTAGCATCTGAATTAAAGACTGTGCCAGCCAGGAGAACTCTGCCC AATGAATGTCTGCCTAGTAGACACCCGAACCCTGATTCTCTTAATCAATG TAGAGAAGTTTTCCATTTTCTCTGAGATGTCTATAATTTTAATCTAAGAA ACAGACTGATAAATAGAGGAAAAGCATTCAGGTTACACCCGAGCAGGAGC ATGGGGGCATAGAGAAATCTGAGACTGGAAGAAAGAGCTGCATGGTTGAA GGCTAGAAAGGACGTTGGGTTACAGAGAGAGCCTCGAAGCTTCTGTGCAT GGCTGAAGAGAGGCAAGCAGTTCCACTCTGGAGGTCAGGCCGCACCCCTG GCAGACTTCTGAGGAATCTGTGATGTCCTGTGAAAGGCTTTCGGGCAGCA TTAGATAAGGCCAGTTAGGGGGAGTCCCCGGGGAAGTGTGTTCACTATCG CTGCTGATTTTACACATCTGGATCTTCCGACAAGGACAGATTTTAGAGCT CTTCCTAGGTAGAAGGTCTCTGAATAGCTATCTCAGAACATAATAAAAAA AATGTGCATTTTGGGGGTGGGCTATTTTGAGCTCCCTTACCAGGCAGAGC TAATGAAGACGACAAAGGTATTGGAAACAGTTAAGC	GAAAAACTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAG CCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAG TTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAA AGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCT TTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTCTACTGTAA AGGAAACTGTGATAAAACATTTCCAGAGATATAAATTTCTAACGCCCCCA CCTCCTACCCTCACCAGTCTACTGAATCCCATCCTTGCTATTGACCTACT AATTAATAGCTATCTCTGAGTCATTGAACCCTCTGTATAGAGAGATGATG GGGTCACCAACAGCCTTACTTAGTACTTATCCACCTGCTTCATCAAGCCA AGCACTATAAAAATCAAATTAATCAGCTGCAGTAATGTGATTTCTCAGTG CCTACTAATCAAGCAGGGAGGGGAAAACTACTTATATGCAGAAAAGACAT CTGGGTGTGGGGTGGGTGGCAGGAAAAGAATTAGCCTAGAGGGCAGGGAA CCTAGAGGAAATACAACTTAATTCTTCATTAGTCGTGTGTTACAGCGGAA TAAGCAGGCACACTTACTGTC
quality values	Open. Hide. 0 0 3 6 6 8 23 14 15 15 19 24 28 35 31 29 28 24 22 22 37 27 21 10 10 10 21 21 41 28 28 26 25 22 21 21 11 11 8 8 8 7 7 7 9 8 6 6 6 6 6 8 13 22 22 28 28 31 31 33 33 27 25 27 21 9 7 7 7 7 7 9 12 11 19 19 23 28 23 28 25 34 34 53 53 53 53 53 53 53 53 53 53 47 47 47 47 47 47 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 51 50 59 46 43 40 44 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 48 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 68 68 68 68 68 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 43 32 18 32 24 23 18 18 12 13 24 41 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 57 59 54 59 59 57 68 68 68 68 68 68 59 57 57 57 57 57 57 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 44 41 41 44 59 59 59 59 59 59 59 59 59 59 59 59 59 48 57 48 50 50 50 50 50 48 42 50 42 47 44 59 44 41 41 44 44 44 47 59 59 59 59 50 50 50 57 57 44 44 43 43 43 57 59 43 44 36 36 36 43 43 50 50 50 57 48 48 57 57 48 48 48 50 50 59 59 59 44 44 44 37 37 39 44 44 47 47 47 47 48 48 59 59 50 50 48 46 39 39 36 40 39 39 31 25 28 28 39 41 43 43 44 41 41 44 43 43 41 46 46 47 47 43 41 41 37 37 39 39 34 39 43 41 41 46 41 41 46 46 48 59 59 59 48 48 46 59 59 59 37 37 30 25 25 35 34 43 41 41 41 47 47 44 44 41 41 41 41 41 37 35 35 29 32 30 30 25 18 15 19 24 24 21 32 20 19 19 25 29 36 36 34 30 28 35 35 31 31 32 26 26 18 18 18 32 28 25 17 15 15 15 23 26 37 37 39 30 27 24 27 30 29 32 28 32 35 39 25 28 13 13 14 21 30 41 41 31 29 16 16 14 17 17 19 9 10 10 18 13 17 17 26 25 36 36 32 31 28 17 19 23 9 12 9 13 11 10 11 21 20 24 28 26 35 28 28 25 17 15 16 15 15 15 27 21 17 13 13 21 25 12 12 11 11 11 21 21 24 19 14 14 10 10 10 11 12 11 12 12 21 19 17 20 15 15 19 27 16 11 9 9 8 8 10 19 21 21 21 17 17 17	Open. Hide. 8 8 8 8 6 6 6 6 6 7 11 19 10 8 8 8 8 19 28 41 41 44 41 36 31 41 37 37 37 37 37 37 43 39 37 39 30 22 22 13 10 10 11 9 11 13 14 17 24 24 30 29 37 37 35 35 35 37 37 37 36 36 37 59 43 43 25 18 15 10 10 10 10 14 17 25 37 37 31 31 35 35 33 33 48 44 44 59 42 33 28 28 37 37 43 43 43 59 59 39 32 33 33 30 30 43 43 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 44 44 44 48 44 35 37 33 32 32 32 42 43 43 43 44 44 68 48 48 42 43 43 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 44 44 29 38 43 43 52 52 59 52 52 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 43 35 35 43 59 43 43 43 35 33 43 33 43 43 44 44 68 68 68 68 44 44 35 35 43 44 59 68 59 59 35 35 43 44 57 68 57 57 52 43 43 62 44 44 39 39 43 62 62 44 43 35 35 43 44 38 43 35 44 41 41 34 39 43 62 62 68 68 68 68 59 44 39 35 35 38 38 68 43 43 34 34 43 35 35 59 59 43 43 39 43 43 43 44 44 68 68 68 68 68 62 62 52 43 43 62 62 68 68 68 68 62 62 43 43 43 62 62 43 43 31 35 44 44 68 68 68 68 68 68 68 68 62 62 43 52 45 62 43 43 43 39 39 43 39 31 31 35 43 43 43 43 43 43 45 43 43 43 31 31 38 43 35 44 35 35 43 43 52 52 62 62 62 39 43 43 39 39 39 43 43 43 62 43 52 52 62 62 62 62 52 45 45 52 52 43 52 57 57 68 68 68 68 57 57 39 39 43 44 43 52 45 52 41 41 41 41 20 28 28 44 44 59 44 43 33 33 39 42 42 42 44 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 35 33 38 38 33 32 43 43 32 38 20 20 32 41 43 52 43 44 44 57 57 44 57 57 59 59 43 42 32 32 35 37 42 47 43 42 42 29 28 32 32 28 44 36 30 25 25 44 37 42 39 39 43 59 59 68 68 68 59 47 36 32 30 44 44 68 68 44 44 23 23 14 21 21 34 34 37 35 59 59 68 59 59 59 57 57 57 37 43 37 32 24 23 14 32 35 31 23 28 37 37 37 43 41 41 28 25 25 36 30 35 30 32 39 41 44 44 44 47 47 50 41 44 48 43 43 36 39 39 59 59 59 59 43 31 28 20 34 41 59 59 34 41 20 25 25 28 32 28 41 41 57 48 48 48 59 59 59 59 59 59 59 59 59 59 37 37 35 36 36 44 59 59 47 37 33 33 33 27 23 15 13 13 21 23 27 39 31 31 30 32 30 32 34 30 26 28 22 15 21 27 27 41 41 41 37 37 41 39 37 31 31 37 37 39 39 36 37 39 39 32 34 28 23 23 28 28 32 32 20 28 24 37 34 32 32 39 39 40 40 40 39 37 41 39 39 31 37 29 31 28 28 25 36 26 32 21 20 23 23 28 34 35 33 31 32 20 18

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no486_a04.b1 MSMg01no486_a04.b1 CHROMAT_FILE:
MSMg01no486_a04.b1 PHD_FILE: MSMg01no486_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:11 2005
         (507 letters)



>mm_chr1_167073302_167074208
          Length = 907

 Score =  963 bits (498), Expect = 0.0
 Identities = 504/506 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   gcaggggtcattcattcccagcaatccactagcatctgaattaaagactgtgccagccag 61
           |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 707 gcaggggtcattcattcccagcaatccactagcatctgaattaaaggctgcgccagccag 648

                                                                       
Query: 62  gagaactctgcccaatgaatgtctgcctagtagacacccgaaccctgattctcttaatca 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gagaactctgcccaatgaatgtctgcctagtagacacccgaaccctgattctcttaatca 588

                                                                       
Query: 122 atgtagagaagttttccattttctctgagatgtctataattttaatctaagaaacagact 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgtagagaagttttccattttctctgagatgtctataattttaatctaagaaacagact 528

                                                                       
Query: 182 gataaatagaggaaaagcattcaggttacacccgagcaggagcatgggggcatagagaaa 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gataaatagaggaaaagcattcaggttacacccgagcaggagcatgggggcatagagaaa 468

                                                                       
Query: 242 tctgagactggaagaaagagctgcatggttgaaggctagaaaggacgttgggttacagag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tctgagactggaagaaagagctgcatggttgaaggctagaaaggacgttgggttacagag 408

                                                                       
Query: 302 agagcctcgaagcttctgtgcatggctgaagagaggcaagcagttccactctggaggtca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agagcctcgaagcttctgtgcatggctgaagagaggcaagcagttccactctggaggtca 348

                                                                       
Query: 362 ggccgcacccctggcagacttctgaggaatctgtgatgtcctgtgaaaggctttcgggca 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggccgcacccctggcagacttctgaggaatctgtgatgtcctgtgaaaggctttcgggca 288

                                                                       
Query: 422 gcattagataaggccagttagggggagtccccggggaagtgtgttcactatcgctgctga 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gcattagataaggccagttagggggagtccccggggaagtgtgttcactatcgctgctga 228

                                     
Query: 482 ttttacacatctggatcttccgacaa 507
           ||||||||||||||||||||||||||
Sbjct: 227 ttttacacatctggatcttccgacaa 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no486_a04.g1 MSMg01no486_a04.g1 CHROMAT_FILE:
MSMg01no486_a04.g1 PHD_FILE: MSMg01no486_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:11 2005
         (637 letters)



>mm_chr1_167029343_167030379
          Length = 1037

 Score =  791 bits (409), Expect = 0.0
 Identities = 427/433 (98%)
 Strand = Plus / Plus

                                                                       
Query: 205 tttctactgtaaaggaaactgtgataaaacatttccagagatataaatttctaacgcccc 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 405 tttctactgtaaaggaaactgtgataaaacatttccagagatataaatttctaatacccc 464

                                                                       
Query: 265 cacctcctaccctcaccagtctactgaatcccatccttgctattgacctactaattaata 324
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cacctcctaccctcaccaatctactgaatcccatccttgctattgacctactaattaata 524

                                                                       
Query: 325 gctatctctgagtcattgaaccctctgtatagagagatgatggggtcaccaacagcctta 384
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gctatctctgagtcactgaaccctctgtatagagagatgatggggtcaccaacagcctta 584

                                                                       
Query: 385 cttagtacttatccacctgcttcatcaagccaagcactataaaaatcaaattaatcagct 444
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 attagtacttatccacctgcttcatcaagccaagcactataaaaatcaaattaatcagct 644

                                                                       
Query: 445 gcagtaatgtgatttctcagtgcctactaatcaagcagggaggggaaaactacttatatg 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcagtaatgtgatttctcagtgcctactaatcaagcagggaggggaaaactacttatatg 704

                                                                       
Query: 505 cagaaaagacatctgggtgtggggtgggtggcaggaaaagaattagcctagagggcaggg 564
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 705 cagaaaagacatctgggtgtggggtgggtggcagaaaaagaattagcctagagggcaggg 764

                                                                       
Query: 565 aacctagaggaaatacaacttaattcttcattagtcgtgtgttacagcggaataagcagg 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aacctagaggaaatacaacttaattcttcattagtcgtgtgttacagcggaataagcagg 824

                        
Query: 625 cacacttactgtc 637
           |||||||||||||
Sbjct: 825 cacacttactgtc 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information