Query= MSMg01no486_p08.b1 MSMg01no486_p08.b1 CHROMAT_FILE:
MSMg01no486_p08.b1 PHD_FILE: MSMg01no486_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:25 2005
(465 letters)
>mm_chr1_167581764_167582627
Length = 864
Score = 822 bits (425), Expect = 0.0
Identities = 455/465 (97%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 ttatttgatcaattgatttccatcaatcaaagcccaaaatgggcattagattgggaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatttgatcaattgatttccatcaatcaaagcccaaaatgggcattagattgggaatgg 260
Query: 61 gaaaccacttactactgtttactgcctgtttctgccagccaggtattctggaaagaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaccacttactactgtttactgcctgtttctgccagccaggtattctggaaagaccca 320
Query: 121 ggataggcttgggtgcctagggatgtgccaagattctggctctggggaatccttttgccc 180
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ggataggcttgggtccctagggatgtgccaagattctgcctctggggaatccttttgccc 380
Query: 181 tagagtctgaggcattctgactttaatcttggatcaggctggagagggaccaaagaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagtctgaggcattctgactttaatcttggatcaggctggagagggaccaaagaagat 440
Query: 241 aggaagcataagccctcacagattagacagataattcaccccggcagaggtgctccttaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaagcagaagccctcacagattagacagataattcaccccggcagaggtgctccttaa 500
Query: 301 actgtactctgatgaacaggggcctaataggttagcactgttggagccccgcgtccttgg 360
||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 501 actgtactctgatgaacaggggcctaataggttagcactgttggagctcggtgtccttgg 560
Query: 361 acaatctccagacctacatgccttcctttctaaaaccaggagggtgggctaaatagcata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 acaatctccagacctacatgccttcctttctaaaaccaggagggtgggctaaatagtata 620
Query: 421 aaagttttgcctctcagtagtgagtgggggttggggtgtgtgtgt 465
|||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 621 aaagttttgcctctcagtggtgagtgggggttgggggg-gtgtgt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 864
Length adjustment: 10
Effective length of query: 455
Effective length of database: 854
Effective search space: 388570
Effective search space used: 388570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_p08.g1 MSMg01no486_p08.g1 CHROMAT_FILE:
MSMg01no486_p08.g1 PHD_FILE: MSMg01no486_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:25 2005
(651 letters)
>mm_chr1_167657779_167658829
Length = 1051
Score = 1071 bits (554), Expect = 0.0
Identities = 626/664 (94%), Gaps = 28/664 (4%)
Strand = Plus / Minus
Query: 1 tcatcacttcactgagcaggggaaaagttgaattttgaagaagttacacagacttgataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tcatcacttcactgagcaggggaaaagttgaattttgaagaagttacacagacttgataa 749
Query: 61 g-----a--tt------agaggtgcctcaaaactccttcttcttattaaagacataaacg 107
| | || ||||||| |||||| | || || ||||||||||||||||| |
Sbjct: 748 ggtcataccttctggacagaggtgtctcaaagc-cc--ctccttattaaagacataaatg 692
Query: 108 acccatcaagccaggcaagaagccaggtagtagcagctgatatatgtcctccaaatatgt 167
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 691 acccatcaagccaggcaagaagccaggtagtagcagctgatatctgtcctccaaatatgt 632
Query: 168 tctctctttaaaaaatgacaacagatttttctcccctgcatgtgtggcagaatcagtaaa 227
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 631 tctctctttaaaaaatgacaacagatttgtctcccctgcatgtgtggcagaatcagtaaa 572
Query: 228 gactacatttcccaacatgctttgcacctactgtatggatcaacacagactataagtaaa 287
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 571 gactacatttcccaacatgctttgcacctaaagtatggatcaacacagactataagtaaa 512
Query: 288 agagtatgtgaagtcatccaggccagatgtcctatgccttcctccatcctgaatggcagg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agagtatgtgaagtcatccaggccagatgtcctatgccttcctccatcctgaatggcagg 452
Query: 348 tgaagaatgtgatggttggagccgaggaagccatgttgatgtatactggctctgaactac 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgaagaatgtgatggttggagccgaggaagccatgttgatgtatactggctctgaactac 392
Query: 408 tcacctgggaattttatgtgaagaagtaagctgaagtctaagccactgcattttgtattt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcacctgggaattttatgtgaagaagtaagctgaagtctaagccactgcattttgtattt 332
Query: 468 cttgctgtaaccacttagcatttactctaactgatgtgaatcgaaaataatcgtcacaag 527
||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 331 cttgctgtaaccacttagcatttactctaactgatgtgaatcg-----------ca-aag 284
Query: 528 ggaaggaaactggcacattagatgctagcagctaaatcagggtgtcagaggatattgtta 587
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggaaggaaactggcacattagatactagcagctaaatcagggtgtcagaggatattgtta 224
Query: 588 ccaataggttatgcctgatgctgtcacctatagtcaccatgtagagcccaagctcatgca 647
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 223 ccaataggttatgcctgatgctgtcacctatagtcaccatgtagggcccaagctcatgca 164
Query: 648 taca 651
||||
Sbjct: 163 taca 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
