NNNNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGT
TTCATTAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGC
TGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTACTACAAGGAGATAAGTATGGATCGAT
TCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGATCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTT
CTTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCA
GAC

NNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAGAAAAAATAAACCAA
GGAGTATCTGGATATTTTATTTTGCTATTATAGTTTTGAAATTTCAGCCA
AATATTTCTGCTGCCAACCCAGATAGCCATCAGCCTTGTTTTTAATAACT
TGACATGGCTAAATTGTTTATTTTCACCCTAAGAAGTTAGCAAGGCTACC
TCAGGAAAACAATTAAATAGTAGTGGTAAGTTTGTTGTTACATCTTTTGT
GTGCTAATGGATTAGTCACTTTCTTAAAATCACCTAATTAATTTAGATAC
TTGTGTTGCCTCTGTCTAAATCAAAGGACCAATTGGTCCACTTGACATCG
ACTTTTGTATCTTTGAATGACAGGCACTTACAAACCAACAACTTGAGATC
ACTGAAAACCAAATGATGTGGTTTGTTTTGGAAATAGTGACTTGTATTTA
GGATGTTTGAGGAATGCAGAATCCAATAACAACCGTAGTTTTTTGTTTGT
GTGNGNCTGGTTTTTTTTTTCCTCTCTTTGNTCTTCAGTGTAACAGTGAC
TACGTGCCTGTGTGTGGCTCTAATGGAGAGAGCTACCAGAATGAATGCTA
TCTGAGGCAAGCTGCCTGCAAACAGCAGAGTGAGATACTTGTGGTCTCAG
AAGGATCCTGTGCTACAGGTAGGCACAAATGTTCCTGAAATGGACTGTGA
GTTCAATGGTTGAA

Query= MSMg01no487_b05.g1 MSMg01no487_b05.g1 CHROMAT_FILE:
MSMg01no487_b05.g1 PHD_FILE: MSMg01no487_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:35 2005
         (585 letters)



>mm_chr1_50994354_50995334
          Length = 981

 Score =  990 bits (512), Expect = 0.0
 Identities = 565/585 (96%), Gaps = 4/585 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatagaaaaaataaaccaaggagtatctggatattttattttgctattatagttttgaaa 60
           |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagaaaaaataagccaaggagtaactggatattttattttgctattatagttttgaaa 260

                                                                       
Query: 61  tttcagccaaatatttctgctgccaacccagatagccatcagccttgtttttaataactt 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tttcagccaaatatttctgctgccaacacagatagccatcagccttgtttttaataactt 320

                                                                       
Query: 121 gacatggctaaattgtttattttcaccctaagaagttagcaaggctacctcaggaaaaca 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gacatggctaaattgtttattttcaccctaaaaagttagcaaggctacctcaggaaaaca 380

                                                                       
Query: 181 attaaatagtagtggtaagtttgttgttacatcttttgtgtgctaatggattagtcactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 attaaatagtagtggtaagtttgttgttacatcttttgtgtgctaatggatcagtcactt 440

                                                                       
Query: 241 tcttaaaatcacctaattaatttagatacttgtgttgcctctgtctaaatcaaaggacca 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttaaaatcacctcattaatttagatacttgtgttgcctctgtctaaatcaaaggacca 500

                                                                       
Query: 301 attggtccacttgacatcgacttttgtatctttgaatgacaggcacttacaaaccaacaa 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attggtccacttgacat-gacttttgtatctttgaatgacaggcacttacaaaccaacaa 559

                                                                       
Query: 361 cttgagatcactgaaaaccaaatgatgtggtttgttttggaaatagtgacttgtatttag 420
           |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 560 cttgagatcactgaaaaccaaaagatgtggtttgttttggaaatagttacttgtatttag 619

                                                                       
Query: 421 gatgtttgaggaatgcagaatccaataacaaccgtagttttttgtttgtgtgngnctggt 480
           ||||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||   
Sbjct: 620 gatgtttgaggaatgcagaatccaataacaaccatagctttttgtttgtgtgtgtct--- 676

                                                                       
Query: 481 tttttttttcctctctttgntcttcagtgtaacagtgactacgtgcctgtgtgtggctct 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 677 tttttttttcctctctttgttcttcagtgtaacagtgactacgtgcctgtgtgtggctcc 736

                                                        
Query: 541 aatggagagagctaccagaatgaatgctatctgaggcaagctgcc 585
           ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 737 aatggagagagctaccagaatgagtgctacctgaggcaagctgcc 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 981
Length adjustment: 10
Effective length of query: 575
Effective length of database: 971
Effective search space:   558325
Effective search space used:   558325
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)