NTTACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCATTTTCCAAAGCATATCAACAACTTTTTAAAATATA
AACCTTTGAGGTTTTATTTTATTTTTTAAATAAGCTTTACTTGTTTATTT
TGTGTTACTTTGCAGACAAATGTACAGAGGTACTCCTATGGAAAATCAAG
CTTGAACGAGTTCTCTTCTTCCAACATGGGAGTCCTAGGGACTTTCTTTA
CTGGGCTAGAAAGGGGTTTGTTGTTGTTGTCTGAGACAGGGTTCTGGTAG
TCCAAACTGGCTTCATTCTTGTGTACTAGAGACTGGCCTTGAAGTCCAGA
GGATTATAGATGCATATCACCACACCTGTCTCCAGACTCCCTTTTTAAAA
GACAAGGTCTCATGTATCCGAGGCTCAAATCAAATTCACTAAGTAGCTAA
GGATGACTGTGAGTATCTGATCCTCCTGCCTCCAGCCCCTGAGCACAAGG
ATTACACATGTATTCTACCATGCCTGGCTCATGTGTAGCGGAGATTGAAC
CCAGAGCATCGTCTCTTCAAAGCAAGCATCCTACCATGTGAGCCACATGG
CTGTGTCCCTCCTCACTTTTTTCCTCATTCACAGTGGTCATCCGGCTTTA
GCTGCCTGAATCCTGAAATTACAGGCCTGTGCCACTACATCCAACTCAAG
TTTATCTCTCCTCTTTTTGCCCAACAACACAGGTGCTCCTAGAACT

NCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTTCCAGAAACCACATGG
TGGCTCACAACCATCTGTAATGGGCAGCCTATTCCCTCTTCTGGTGTGTC
TGAAGACAGCAACAGTGTACCCACATACATGAAATAAATAAAAAATCTTG
GGAAGACCCACTTCCAGGTGCTCTAACATAACCAGGATCATAGGATCAGA
GGTGAAGAGGACACAACATCTGCCCCATCACTGGAAGTAACTGGGACCAG
TGAGACCCAGGCACCCAAGAACTCGGTCCAACCAGTGGCACGGGTTCCTT
CCAGTCTGAGCTGGTGCCCTGAGCAGAACTTGGGCATGAGCTCCACAACC
AGTCCCACAACACCCAGAAAAAACTCCACCCCCAGGTACTCTAACATGCC
CAGGTCCACTGGACCCCAGGAGCTTGGTCACACGGTATCTCAGGCTCCCA
GAAGCAGCTTGACTCCCAGGAGCTCTGACACACCCAGGATCTCAGGATCA
CAGAATCACAGGATCATAGAGGCAGCTGAACTCCAAGGAGTTCTGACACA
ACCAGGATCACAGGAAGGACAGGCTCCAGTCAGATATATCGAGGGCAGGT
AGCACTAGAGATAATAAGACGGTGGGAGGCAAGTGTAAGAACACAAGCGA
CAGAAACCAAGGTTACCTGGCATCATCAGATCCCAATTCTCCCA

Query= MSMg01no487_g01.b1 MSMg01no487_g01.b1 CHROMAT_FILE:
MSMg01no487_g01.b1 PHD_FILE: MSMg01no487_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:58 2005
         (676 letters)



>mm_chr1_78616153_78617228
          Length = 1076

 Score = 1172 bits (606), Expect = 0.0
 Identities = 618/622 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaccattttccaaagcatatcaacaactttttaaaatataaacctttgaggtt 64
           ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattctcaccagactccaaagcatatcaacaactttttaaaatataaacctttgaggtt 563

                                                                       
Query: 65  ttattttattttttaaataagctttacttgtttattttgtgttactttgcagacaaatgt 124
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttattttatttttaaaataagctttacttgtttattttgtgttactttgcagacaaatgt 503

                                                                       
Query: 125 acagaggtactcctatggaaaatcaagcttgaacgagttctcttcttccaacatgggagt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 acagaggtactcctatggaaaatcaagcttgaacgagttctcttcttccaacatgggagt 443

                                                                       
Query: 185 cctagggactttctttactgggctagaaaggggtttgttgttgttgtctgagacagggtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctagggactttctttactgggctagaaaggggtttgttgttgttgtctgagacagggtt 383

                                                                       
Query: 245 ctggtagtccaaactggcttcattcttgtgtactagagactggccttgaagtccagagga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctggtagtccaaactggcttcattcttgtgtactagagactggccttgaagtccagagga 323

                                                                       
Query: 305 ttatagatgcatatcaccacacctgtctccagactccctttttaaaagacaaggtctcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttatagatgcatatcaccacacctgtctccagactccctttttaaaagacaaggtctcat 263

                                                                       
Query: 365 gtatccgaggctcaaatcaaattcactaagtagctaaggatgactgtgagtatctgatcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtatccgaggctcaaatcaaattcactaagtagctaaggatgactgtgagtatctgatcc 203

                                                                       
Query: 425 tcctgcctccagcccctgagcacaaggattacacatgtattctaccatgcctggctcatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcctgcctccagcccctgagcacaaggattacacatgtattctaccatgcctggctcatg 143

                                                                       
Query: 485 tgtagcggagattgaacccagagcatcgtctcttcaaagcaagcatcctaccatgtgagc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tgtagcggagattgaacccagagcatcgtctcttcaaagcaagcatcctaccatgtgagc 83

                                                                       
Query: 545 cacatggctgtgtccctcctcacttttttcctcattcacagtggtcatccggctttagct 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  cacatggctgtgtccctcctcacttttttcctcattcacagtggtcatccggctttagct 23

                                 
Query: 605 gcctgaatcctgaaattacagg 626
           ||||||||||||||||||||||
Sbjct: 22  gcctgaatcctgaaattacagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)