NNAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAGATG
GGCGGAATTCTGGGTGTTTCGTCTGAAATCATCAGAAAAGCCTGAAGTAG
AGCTGAGTCTTCCTTGAAAGAAATATTGCCTAGGAGCTCAGAGAAGGTTC
AGTCAGTAAACTGTTTGCCAAGAATTATGAAGGTCTGTCTCCAGAACACA
CCTTAAGAGCTGAATATGGTTGCATAAGTTTGTAATCGTAGTGTGTTAGA
GGCAGAGACAGTGAGGGTCTCATTGGTGAACCAGCCTAGCCTAAGTAGTC
AGTTCTGCCAAAGGAGGATCCCTATTTTATTCTTATGGACCGCTCCTGGG
AGGACACACTGTTGTCCTCTGACATACACACACACACACACACACACACA
CACACACACACACACACTCACACACACTCACACACACACACACACACAGA
CAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGATGAAAACATTCACACA
AACAAGTACACACATATTTACCCTTACACATGAATCCACACAGAGACATA
CACATATGTGAACACAGGCAAACACATATCCACACTTGTACCCAAACACA
CACACACACACACACACACACAATGAAACTTACATAAAACTCACACACTC
ATATTCACACAGGCACTCATATACCCATAACGCATACTAACACACATGCA
CACTAACACATATGCAGATGTGACCACACATATGCATATGGA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAAATTTGTGGAATAAACAAATAATA
AATAAACAAAATAGAAGCAGGCATTAATTCATGAGCCTTGTTTTTCAAGT
ATGCTAAGTGTAAAGTCCTCATTTCAACTCCTGCTGGAAGGCAGTCATTC
TTATTCAGTGAGACATACTGAAGGTCAGAGTGAACAGCCTACAGGAAGAT
TAGCTATACCTGACCCCTGAAGGTTATACAGTGTCACCTGTGCCCAGGTG
TGTGTGTTTGTGTATTTGTGTGTTTGTGTGTATGTGAGGGGAGTGTAAAT
GTGCATGCACACATATTGTGTGTGCCAATATCTAACTCTTGCTATCAGGC
TTGGCAGCCAACACCTTTATACACTGAAACATCATTTGGACCTCTGATAC
ATTAAAGCTAGTTTAAGAAAATTGTTTCTGTCCCTACTCTATGCAGAAAT
TAGCTGAAGATTTAAAAATATATGATATCAGTAATGACAGTCTCTTTTAA
CATTGAGACAAAATCTGTGTGGTAGTGACAGCCATTACCTTTTTGGTGGA
GGGACTCAGATCATACAGTAGGCACTCAACAGATTGGGTTTTTTGGTTGG
GTGTTTTTCGTTTCTTGATTTTTGCGTTTCCGGTTCCGCGGGGATAAACC
ACTCTTTATAATCACTGGGTTGCTTCCAAGTTGGGTCCAGGTCTGTCTTT
CTC

Query= MSMg01no487_i17.g1 MSMg01no487_i17.g1 CHROMAT_FILE:
MSMg01no487_i17.g1 PHD_FILE: MSMg01no487_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:11 2005
         (497 letters)



>mm_chr1_117996847_117997743
          Length = 897

 Score =  961 bits (497), Expect = 0.0
 Identities = 497/497 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaatttgtggaataaacaaataataaataaacaaaatagaagcaggcattaattcatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatttgtggaataaacaaataataaataaacaaaatagaagcaggcattaattcatga 260

                                                                       
Query: 61  gccttgtttttcaagtatgctaagtgtaaagtcctcatttcaactcctgctggaaggcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccttgtttttcaagtatgctaagtgtaaagtcctcatttcaactcctgctggaaggcag 320

                                                                       
Query: 121 tcattcttattcagtgagacatactgaaggtcagagtgaacagcctacaggaagattagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcattcttattcagtgagacatactgaaggtcagagtgaacagcctacaggaagattagc 380

                                                                       
Query: 181 tatacctgacccctgaaggttatacagtgtcacctgtgcccaggtgtgtgtgtttgtgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatacctgacccctgaaggttatacagtgtcacctgtgcccaggtgtgtgtgtttgtgta 440

                                                                       
Query: 241 tttgtgtgtttgtgtgtatgtgaggggagtgtaaatgtgcatgcacacatattgtgtgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtgtgtttgtgtgtatgtgaggggagtgtaaatgtgcatgcacacatattgtgtgtg 500

                                                                       
Query: 301 ccaatatctaactcttgctatcaggcttggcagccaacacctttatacactgaaacatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaatatctaactcttgctatcaggcttggcagccaacacctttatacactgaaacatca 560

                                                                       
Query: 361 tttggacctctgatacattaaagctagtttaagaaaattgtttctgtccctactctatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttggacctctgatacattaaagctagtttaagaaaattgtttctgtccctactctatgc 620

                                                                       
Query: 421 agaaattagctgaagatttaaaaatatatgatatcagtaatgacagtctcttttaacatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaattagctgaagatttaaaaatatatgatatcagtaatgacagtctcttttaacatt 680

                            
Query: 481 gagacaaaatctgtgtg 497
           |||||||||||||||||
Sbjct: 681 gagacaaaatctgtgtg 697


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)