Query= MSMg01no487_p06.b1 MSMg01no487_p06.b1 CHROMAT_FILE:
MSMg01no487_p06.b1 PHD_FILE: MSMg01no487_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:43 2005
(138 letters)
>mm_chr1_88330178_88330714
Length = 537
Score = 228 bits (118), Expect = 9e-65
Identities = 130/134 (97%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 1 actaaaaacaggagtgccccagcctgggagagtaactggaattgctggtgccaagaggtt 60
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 actagaaacaggagtgccccagcctgggagagtaactggaag-gctggtgccaagaggtt 259
Query: 61 ctgggtctgtcacacctggtttcagggttttgtattccgccatgatgtggaagagacacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgggtctgtcacacctggtttcagggttttgtattccgccatgatgtggaagagacacg 319
Query: 121 ggggggaggggggg 134
|||||| |||||||
Sbjct: 320 gggggg-ggggggg 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 537
Length adjustment: 8
Effective length of query: 130
Effective length of database: 529
Effective search space: 68770
Effective search space used: 68770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no487_p06.g1 MSMg01no487_p06.g1 CHROMAT_FILE:
MSMg01no487_p06.g1 PHD_FILE: MSMg01no487_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:43 2005
(469 letters)
>mm_chr1_88533044_88533912
Length = 869
Score = 868 bits (449), Expect = 0.0
Identities = 464/469 (98%)
Strand = Plus / Minus
Query: 1 ctttccaccctcctggaccgacctcccacagctatctttgaaaagccagcatattacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ctttccaccctcctggaccgacctcccacagctatctttgaaaagccagcatattacatg 760
Query: 61 ggactgagaactaagtctcggctttggaataacagatctgattgaaacttgcctctgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ggactgagaactaagtctcggctttggaataacagatctgattgaaacttgcctctgaca 700
Query: 121 cttaacagccttatgactttgggaaaattaggggacagaactgaacactgtattctccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cttaacagccttatgactttgggaaaattaggggacagaactgaacactgtattctccag 640
Query: 181 gagcagcagggcgtcctaatctatgggaagggcccacaccctccatcctttctcaaagag 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gagcagcagggtgtcctaatctatgggaagggcccacaccctccatcctttctcaaagag 580
Query: 241 gcagtctctttcccagtttctgtgttctgttctacccttccacagcagctaatctctgaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gcagcctctttcccagtttctgtgttctgttctacccttccacagcagctaatctctgaa 520
Query: 301 agcctcttatgaaaggaaaatggaaagtagccaaaccaaccatattctctgaggattcca 360
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 519 agcctcttatgaaaggaaaatggaaagtagccaaaccaatcatattctctgaagattcca 460
Query: 361 aatacggcaacatagggagtgaatagcattggaccgggtccagtggagcctgggatgaag 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aatacggcaaaatagggagtgaatagcattggaccgggtccagtggagcctgggatgaag 400
Query: 421 tctccagctcatctttggttttcgtttggttattggtttggggttgttg 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tctccagctcatctttggttttcgtttggttattggtttggggttgttg 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
