Query= MSMg01no487_p17.b1 MSMg01no487_p17.b1 CHROMAT_FILE:
MSMg01no487_p17.b1 PHD_FILE: MSMg01no487_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:45 2005
(647 letters)
>mm_chr1_77278976_77280023
Length = 1048
Score = 1108 bits (573), Expect = 0.0
Identities = 607/625 (97%), Gaps = 13/625 (2%)
Strand = Plus / Minus
Query: 23 attttacacatgagcctttcaatgaaggataagaccctgtcagttctcctggccctgcca 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 attttacacatgagcctttcaatgaaggataagaccctgtcagttctcctggccctgcca 984
Query: 83 cgtgaaggttagctgattttctcttctggatgagccccactctcctgtaaacattttgcc 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 983 cgtgaaggttagctgattttctcttctggatgagccccactctcctgtaaacatttggcc 924
Query: 143 cacagtatgtgtgtaatcgactggccattctgactggtattgctggatgtagtcagcttt 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 cacagtatgtgtgtaatcgactggccattctgactggtattgctggatgtagtcagcttt 864
Query: 203 cttaaacgtgggccttataaatcacaggaggccaagtcaaagcagcctttgaagcaccca 262
|||||||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct: 863 cttaaacgtggg----------caca--aggccaagtcaaagcagcatttgaagcacccg 816
Query: 263 cggtttgcttagaatgtcttccttcactagaatgagggcatgctccacttccatttccag 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cggtttgcttagaatgtcttccttcactagaatgagggcatgctccacttccatttccag 756
Query: 323 tagactttaccatgccctaaattaaagaaata-tttttttttcagaatttgctataaatt 381
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 755 tagactttaccatgccctaaattaaagaaatattttttttttcagaatttgctataaatt 696
Query: 382 tctcatggtccccgccttcaaggtacgttcttaactttctttttcttgagcctacagact 441
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 695 tctcatggtccccgccttcaaggtacattcttaactttctttttcttgagcctacagact 636
Query: 442 tctaagtttaatgaggagggtggggagcccacagcacaacgatataaaaatatcatccgg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tctaagtttaatgaggagggtggggagcccacagcacaacgatataaaaatatcatccgg 576
Query: 502 aagcccagctaagcaagccaactgagaaatcccagctgaaggcaaaatcttaggtggatc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aagcccagctaagcaagccaactgagaaatcccagctgaaggcaaaatcttaggtggatc 516
Query: 562 aattttccattctctatgacagtagctctgaagtgtggtccccaggtcagcagtcgtatg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aattttccattctctatgacagtagctctgaagtgtggtccccaggtcagcagtcgtatg 456
Query: 622 tgggaaaagctactctagaatccac 646
||||||||||| |||||||||||||
Sbjct: 455 tgggaaaagctgctctagaatccac 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_p17.g1 MSMg01no487_p17.g1 CHROMAT_FILE:
MSMg01no487_p17.g1 PHD_FILE: MSMg01no487_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:45 2005
(676 letters)
>mm_chr1_77140251_77141324
Length = 1074
Score = 1257 bits (650), Expect = 0.0
Identities = 669/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 1 aacagaatacttagaaaacatataataaagcattatagaaaagaaaataaaaactactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagaatacttagaaaacatataataaagcattatagaaaagaaaataaaaactactat 260
Query: 61 tgactggtagcttttttcctttggaactattattttgaggttaagagaccaaaaatgact 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactgatagcttttttcctttggaactattattttgaggttaagagaccaaaaatgact 320
Query: 121 ttgaggaagctattacttaagccaaaagtttcattttgcaagatagaaataggttatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaggaagctattacttaagccaaaagtttcattttgcaagatagaaataggttatcac 380
Query: 181 attgaaatatttggaagatatatatatatatacacatatacattttaaatttaaacaggg 240
||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 attgaaatatttggaag--atatatatatatacacatacacattttaaatttaaacaggg 438
Query: 241 agaagttgcatttctctgtggcaggagctgtctttttacacagcagcttttgttgttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaagttgcatttctctgtggcaggagctgtctttttacacagcagcttttgttgttcac 498
Query: 301 agtgattgtatggcagactggtgccccagattttagaaaataaaaaacaaaatataatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtgattgtatggcagactggtgccccagattttagaaaataaaaaacaaaatataatct 558
Query: 361 tgcagtcatttacttcctagatgaggaacaggaacacaacccactgagtttggtattttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcagtcatttacttcctagatgaggaacaggaacacaacccactgagtttggtattttg 618
Query: 421 gagtctcagaagtcatataccttcccatagagtaagcaacaggaggaaacaggaactatc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 619 gagtctcagaagtcatataccttcccatagagtaagcaacaggaggaaacaggagctatc 678
Query: 481 caactgttttcatcattttctttaccttcagggaagaaaggatacaaagacaagacaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 caactgttttcatcattttctttaccttcagggaagaaaggatacaaagacaagacaaaa 738
Query: 541 attttatgtcttattgaaaatatggtataagaagtaaaaagagatacaggtagatataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 attttatgtcttattgaaaatatggtataagaagtaaaaagagatacaggtagatataaa 798
Query: 601 gtgatccagcagtctccaagaggtttaacagataataaataaacaaatatagtacaaaaa 660
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 799 gtgatccagcagtctccaagaggttttacagataataaataaataaatatagtacaaaaa 858
Query: 661 ctccatagaccattca 676
||||||||||||||||
Sbjct: 859 ctccatagaccattca 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1074
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1064
Effective search space: 708624
Effective search space used: 708624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
