Query= MSMg01no488_b24.b1 MSMg01no488_b24.b1 CHROMAT_FILE:
MSMg01no488_b24.b1 PHD_FILE: MSMg01no488_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:57 2005
(434 letters)
>mm_chr1_128650395_128651228
Length = 834
Score = 760 bits (393), Expect = 0.0
Identities = 422/433 (97%), Gaps = 3/433 (0%)
Strand = Plus / Plus
Query: 2 attagattccattcttactcccctcagttgaatctataggactatcttctctctcaagat 61
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 202 attagattccattcttactcccctcagttgaatctataggactatcttctcccccaagat 261
Query: 62 gtacctgtggcagctaaggttagctgctctttcacgatttgaataacccaatcttaagca 121
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 gtacctgtggcagctaaggttagctgttctttcacgatttgaataacccaatcttaagca 321
Query: 122 ctacagtcattatccagtgacttgcagtaggtctctatagatacatagccaaaaattatt 181
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 322 cgacagtcattatccagtgacttgcagtagggctctatagatacatagccaaaaattatt 381
Query: 182 acatacaacttcaaatatctccaaagaatggacataaatactcccatttcatagatggag 241
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 382 acagacaatttcaaatatctccaaagaatggacataaatactcccatttcatagatgggg 441
Query: 242 aaaactgaggattcaaataagatgatgtaagcatagccctgggtccagcctttgttgtca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaaactgaggattcaaataagatgatgtaagcatagccctgggtccagcctttgttgtca 501
Query: 302 tgagcagcatatttttagtctcttgtccagccagtctgatattttattacaagttattta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgagcagcatatttttagtctcttgtccagccagtctgatattttattacaagttattta 561
Query: 362 ctaacctaagggtaatgattatgattatgatgatgatgatgatgatgtgtgtgtgtgtga 421
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 562 ctaacctaagggtaatgattatgattatgatgatgatgatgatg---tgtgtgtgtgtga 618
Query: 422 gtgtgtgtgtgtg 434
|||||||||||||
Sbjct: 619 gtgtgtgtgtgtg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b24.g1 MSMg01no488_b24.g1 CHROMAT_FILE:
MSMg01no488_b24.g1 PHD_FILE: MSMg01no488_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:57 2005
(644 letters)
>mm_chr1_128794625_128795668
Length = 1044
Score = 1023 bits (529), Expect = 0.0
Identities = 568/583 (97%), Gaps = 4/583 (0%)
Strand = Plus / Minus
Query: 59 aaaaagaaagagaattttatttccttattaatcacatatgttaagaaatttcccattttg 118
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1044 aaaaagaaagagaattttatttccttattaatcacatatgctaagaaatttcccattttg 985
Query: 119 ttgcgattctaatatttatctttgaggaatttgaaattcttatacagtaaacctatgcat 178
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 984 ttgcgattctaatatttatcttttaggaatttgaaattcttatacagtaaacctgtgcat 925
Query: 179 cttttcctttttatactggaaatgttctcatctcaaatttatatagtattgttttcctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 cttttcctttttatactggaaatgttctcatctcaaatttatatagtattgttttcctcc 865
Query: 239 ttagtgtttttttttttttaaattaaagtatatggcaaatgtggaagctctgtgtagatt 298
|||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||
Sbjct: 864 ttagtgtttttttttt----aattaaagtatatggcaaatgtgggagttctgtgtggatt 809
Query: 299 agggaatgagacaggaaatttaattttaatcttaagtcaataggcaattgttattgaagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 agggaatgagacaggaaatttaattttaatcttaagtcaataggcaattgttattgaagt 749
Query: 359 tcaagaaagacaagaggaaacacatttggagaaattgtatctgttagttccttcaattag 418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 748 tcaagaaagacaagaggaaacacatttggagaagttgtatctgttagttccttcagttac 689
Query: 419 tcaaatagtaacgacagattgcctaagagtttactgtaaggttgccactggctagtagac 478
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 688 tcaaatagtaacgacagattgcctaagagtttactgtaaggttgctactggctagtagac 629
Query: 479 tatcctgtgatagtgaaaatggtcagtatgtacggtgttcatggtggtagcaagcacaac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tatcctgtgatagtgaaaatggtcagtatgtacggtgttcatggtggtagcaagcacaac 569
Query: 539 cctgtagctgttaaaatgaagctcatatgctgaaggaatggaattgtaaatgctttgatt 598
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 568 cctgtagctgttaaaatgaagctcatatgctgaaggaatggaattgtaaatggtttgatt 509
Query: 599 gattaaaattggcaagtaacttgtgtctgctagggatcataaa 641
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gattaaaattggcaagtaacttgtgtctgctagggatcataaa 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
