Query= MSMg01no488_l17.b1 MSMg01no488_l17.b1 CHROMAT_FILE:
MSMg01no488_l17.b1 PHD_FILE: MSMg01no488_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:44 2005
(649 letters)
>mm_chr1_94005687_94006735
Length = 1049
Score = 1255 bits (649), Expect = 0.0
Identities = 649/649 (100%)
Strand = Plus / Plus
Query: 1 catcctgcaaactcagccggcaaaacacagtgtttaggtcttgttattcttcaaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcctgcaaactcagccggcaaaacacagtgtttaggtcttgttattcttcaaaagaca 260
Query: 61 tgctgttttccagggacctgggaccaacagcaaactacacagatggcaaggccactttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgttttccagggacctgggaccaacagcaaactacacagatggcaaggccactttgc 320
Query: 121 cagagtcctggggttagaagccttcaatcaagctgtcactccagtgccactaaaattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagtcctggggttagaagccttcaatcaagctgtcactccagtgccactaaaattcta 380
Query: 181 aaggaaaatggtccatgtgacaagagattagcaaccacaaaacacagacacttacttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaaaatggtccatgtgacaagagattagcaaccacaaaacacagacacttacttttc 440
Query: 241 aagaagaataggactttatctggtgatattctaaagttaacaaaaccatattcagaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaagaataggactttatctggtgatattctaaagttaacaaaaccatattcagaagaa 500
Query: 301 catacaaaaccctttggaacctaagacctccttagcgacacacacagctcagtcaagtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catacaaaaccctttggaacctaagacctccttagcgacacacacagctcagtcaagtac 560
Query: 361 acacgctgaggcccctacagttcaaccacaaggcccaggtcaagcaggtgggcctggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acacgctgaggcccctacagttcaaccacaaggcccaggtcaagcaggtgggcctggtac 620
Query: 421 tttcctatagacgccatcaccaccttggcagttcgtattcttgttggtagtctgcagatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcctatagacgccatcaccaccttggcagttcgtattcttgttggtagtctgcagatc 680
Query: 481 tgtgtgagcgctgatggatgccacagcagcaaacctcactcggcaaacctcacttccaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgtgagcgctgatggatgccacagcagcaaacctcactcggcaaacctcacttccaca 740
Query: 541 ccattcaggacagagaatagagcactccttattgctttagccctgacaacttcactaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccattcaggacagagaatagagcactccttattgctttagccctgacaacttcactaggc 800
Query: 601 ctggtgtggagctgtgtgactttattgaagagtctgtgtcttctcgggg 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctggtgtggagctgtgtgactttattgaagagtctgtgtcttctcgggg 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_l17.g1 MSMg01no488_l17.g1 CHROMAT_FILE:
MSMg01no488_l17.g1 PHD_FILE: MSMg01no488_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:44 2005
(640 letters)
>mm_chr1_94182118_94183156
Length = 1039
Score = 1230 bits (636), Expect = 0.0
Identities = 639/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 1 ttgcattccatttatacaaatcaatgagcagagggctaccgtcaaccttcgctgctttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ttgcattccatttatacaaatcaatgagcagagggctaccgtcaaccttcgctgctttat 780
Query: 61 ggctcataaacacagggcagccatacaaagcacacgttgagaacaatcctattcacggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggctcataaacacagggcagccatacaaagcacacgttgagaacaatcctattcacggtg 720
Query: 121 gcggtgagcagagacagacctttcatggcgacttagagtccatggagaaggacgggggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gcggtgagcagagacagacctttcatggcgacttagagtccatggagaaggacgggggca 660
Query: 181 gctgtagactgagtcttttaagctacacgtgggagattttcaaaggcagagccgagcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gctgtagactgagtcttttaagctacacgtgggagattttcaaaggcagagccgagcaag 600
Query: 241 aggactagagtgatgagtcccaggagcccctcgctggagtcaatacggaccagcatctgc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aggac-agagtgatgagtcccaggagcccctcgctggagtcaatacggaccagcatctgc 541
Query: 301 tcctcttgcttcgtctaactgctccacttctcccaaaaccacatgttacgataaatgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcctcttgcttcgtctaactgctccacttctcccaaaaccacatgttacgataaatgaac 481
Query: 361 tgaagaccccagtaaaggcgaacacacacggatggtaaatgcgaacggtataaaactgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgaagaccccagtaaaggcgaacacacacggatggtaaatgcgaacggtataaaactgac 421
Query: 421 agcaacgcttaaataaaatttactgcggcgctaataaagattccaggaggattttttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agcaacgcttaaataaaatttactgcggcgctaataaagattccaggaggattttttaca 361
Query: 481 ctgtcaaaataagccatttatttaggcagaaaagtgaacacattaaaactgcacggaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgtcaaaataagccatttatttaggcagaaaagtgaacacattaaaactgcacggaacc 301
Query: 541 ctttgaaaaagagggcaggctttatgaacttgcatattacattataaagccataaaaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctttgaaaaagagggcaggctttatgaacttgcatattacattataaagccataaaaggc 241
Query: 601 tccattaggaatggagaagcttctttttaaataatctcag 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tccattaggaatggagaagcttctttttaaataatctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1039
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1029
Effective search space: 648270
Effective search space used: 648270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
