Query= MSMg01no490_c11.b1 MSMg01no490_c11.b1 CHROMAT_FILE:
MSMg01no490_c11.b1 PHD_FILE: MSMg01no490_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:39 2005
(706 letters)
>mm_chr1_120967419_120968524
Length = 1106
Score = 1332 bits (689), Expect = 0.0
Identities = 698/701 (99%)
Strand = Plus / Plus
Query: 5 gaattccaggtattcaggcccagtggtgtgaaccgaagtccccagaaagcaggcctcaga 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggtatgaaggcccagtggtgtgaaccgaagtccccagaaagcaggcctcaga 264
Query: 65 gtttcccagtccttaaaataggagttgactgaagacatgtcttccactcagtaactcttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttcccagtccttaaaataggagttgactgaagacatgtcttccactcagtaactcttg 324
Query: 125 ccacattcgtttgggagggtcttctaggcgtttctatgagatcttgctggctggagttgg 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 ccacattcgtttgggagggtcttctaggcgtttctctgagatcttgctggctggagttgg 384
Query: 185 ggagctggagggctggggaggtcctgaggggtgtgtctgtgggaggcaggcaacaacgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggagctggagggctggggaggtcctgaggggtgtgtctgtgggaggcaggcaacaacgtg 444
Query: 245 gggggtgaaggcaggctcagggccggatgggtaggagcctggaggcatgagagacaggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggggtgaaggcaggctcagggccggatgggtaggagcctggaggcatgagagacaggga 504
Query: 305 tggattcttggtggttggggtggaatttgacatcctgccatttccccttatctcctcatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggattcttggtggttggggtggaatttgacatcctgccatttccccttatctcctcatc 564
Query: 365 agaagagaaccagaggagaatgtgagctcaccctaacgcaagccattttcacctcctggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaagagaaccagaggagaatgtgagctcaccctaacgcaagccattttcacctcctggt 624
Query: 425 tcctatcaattaaagcctctgtcatctgctgatcaggttttggaagacttgaaaggcatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcctatcaattaaagcctctgtcatctgctgatcaggttttggaagacttgaaaggcatt 684
Query: 485 tctggggctcattaggctatcagaactctcgtgaatggttgtctccctctgtaagaccag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctggggctcattaggctatcagaactctcgtgaatggttgtctccctctgtaagaccag 744
Query: 545 ggaatcaatctctttacaggcgtccacacaatggagctgggatttgaagctcaattctgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggaatcaatctctttacaggcgtccacacaatggagctgggatttgaagctcaattctgc 804
Query: 605 catttattagctatggcgtgatctcatggtactttcttaattgaagccgtgctatccccc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 catttattagctatggcgtgatctcatggtactttcttaattgaagccgtgctatccccc 864
Query: 665 tgtatcaaacggaagcagtaactgtccaggtccacgtacac 705
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tgtatcaaacggaagcagtaactgtccaggtccacgtacac 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no490_c11.g1 MSMg01no490_c11.g1 CHROMAT_FILE:
MSMg01no490_c11.g1 PHD_FILE: MSMg01no490_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:39 2005
(544 letters)
>mm_chr1_121130845_121131789
Length = 945
Score = 754 bits (390), Expect = 0.0
Identities = 423/434 (97%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 111 cttaactggctggctgctctagttgagtcagcgagctgcaggcaaatgagagtcaagatg 170
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 945 cttaactggctggctgctctagttgagtcagtgagctgcaggcaaatgagagtcaagatg 886
Query: 171 gctcagcatgtgaaggtgcttgctgccaagcctgactacctgagttggatctccagaacc 230
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 885 gctcagcatgtgaaggtgcttgctgccaagcctgactacctgagttggatccccagaacc 826
Query: 231 cacagaattgaaaatgagaattggtcctcacaagttgctctccaacttccacacacatgt 290
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cacagaatagaaaataagaattggtcctcacaagttgctctccaacttccacacacatgt 766
Query: 291 gcatacataccctcatgcacagaaattaagtaaacagaaaagggtggtggtgggaagaac 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gcatacataccctcatgcacagaaattaagtaaacagaaaagggtggtggtgggaagaac 706
Query: 351 tcaagctgggtagtgacagagaactgacacctgaggtctgcctctgacctctacacatac 410
||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 705 ccaagctgggtagtgacagagaactgacacctaaggtcagcctctggcctctacacatac 646
Query: 411 atacaaacacacaaacgaacacgcccccccacaca-aaaatggggcagaagcagggtcca 469
|||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 645 atacaaacacacaaacgaacacgcccacacacacacaaaatggggcagaagcagggtcca 586
Query: 470 gtcatacggtacccagcatctattaacttttcccatgtgactacctccttcccttggaac 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtcatacggtacccagcatctattaacttttcccatgtgactacctccttcccttggaac 526
Query: 530 taagaccttccttc 543
||||||||||||||
Sbjct: 525 taagaccttccttc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 945
Length adjustment: 10
Effective length of query: 534
Effective length of database: 935
Effective search space: 499290
Effective search space used: 499290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
