Query= MSMg01no492_a05.b1 MSMg01no492_a05.b1 CHROMAT_FILE:
MSMg01no492_a05.b1 PHD_FILE: MSMg01no492_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:07 2005
(644 letters)
>mm_chr1_151544235_151545278
Length = 1044
Score = 1199 bits (620), Expect = 0.0
Identities = 638/644 (99%)
Strand = Plus / Plus
Query: 1 taacaaacatgctgaagctgtgagaaaattaattagacaaatggttagcctataatttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taacaaacatgctgaagctgtgagaaaattaattagacaaatggttagcctataatttcc 260
Query: 61 taaattaaggataattcacacttgtaaataatttcatcactagcttaagtaggtacttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaattaaggataattcacacttgtaaataatttcatcactagcttaagtaggtacttgg 320
Query: 121 aggacgctctacacacccacccccaattaaaaaagaaaacatggatatgttttccatatt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aggacgctctacacacccacccccagttaaaaaagaaaacatggatatgttttccatatt 380
Query: 181 tctcataaattcttagcaaccttatcaaattcaggatgcatagcctgtccttgctgctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcataaattcttagcaaccttatcaaattcaggatgcatagcctgtccttgctgctca 440
Query: 241 tttttatacctcagaacctctctccccttatccagctgctttaggaaccacccatatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctttatacctcagaacctctctccccttatccagctgctttaggaaccacccatatcaa 500
Query: 301 ctgacaagtgtcaagcagtgcccaaataaccaagaactcaccatgtttaaagaaatgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 ctgacaagtgtcaagcagtgcccaaataaccaagaactcaccatgtttaaagaaatgctc 560
Query: 361 agtgtggagtacagtaaaggccagagcctcacaaagagacactgcactgaaaaaattgaa 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 agtgtggagtacagtaaaggccagagcctcacaaagagacactgcaatgaaaaaattgaa 620
Query: 421 aatatcttttgggaaatgtgaactttggcccagagtgacaaaacttttgttttacaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatatcttttgggaaatgtgaactttggcccagagtgacaaaacttttgttttacaaatt 680
Query: 481 catttctcagagtcaccgcaaacatggagaatttgccttctgcgctttctctaggagcac 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catttctcagagtcactgcaaacatggagaatttgccttctgcgctttctctaggagcac 740
Query: 541 ttttgtctgtcagacactagatcaactgatgttttcagtatcaacttaaccaaatatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttgtctgtcagacactagatcaactgatgttttcagtatcaacttaaccaaatatcaa 800
Query: 601 tgtctgaaatttctctgaatgctagaatgacaagatatattaat 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtctgaaatttctctgaatgctagaatgacaagatatattaat 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_a05.g1 MSMg01no492_a05.g1 CHROMAT_FILE:
MSMg01no492_a05.g1 PHD_FILE: MSMg01no492_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:07 2005
(344 letters)
>mm_chr1_151707355_151708098
Length = 744
Score = 555 bits (287), Expect = e-162
Identities = 332/351 (94%), Gaps = 7/351 (1%)
Strand = Plus / Minus
Query: 1 tgtccaaagcccgatgaac-------gacctcttagtgtggaaagcgggattggggaata 53
||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 570 tgtccaaagcctgattaacgagctgggacctcttagtgtggaaagcgggattggggaata 511
Query: 54 tgtttagtgtctttaacatttgtgaaaatatttacatttgaatagtcactcagccatgtg 113
|||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||
Sbjct: 510 tgtttagtgtctttaacattcgtgaaaatatttacatttaaatagtcattcagccacgtg 451
Query: 114 aaaggtctgcctgggctccttagctttcagccatggtcagcaaaccaactctaagtaaga 173
|||||||||||||||| ||||||| ||| || |||||||| ||||||||||||| |||||
Sbjct: 450 aaaggtctgcctgggcgccttagcgttctgctatggtcagtaaaccaactctaactaaga 391
Query: 174 acgcagtggtgaaatgtgttaaaattatcaagacttgttgcacatttgacctgtgggtat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acgcagtggtgaaatgtgttaaaattatcaagacttgttgcacatttgacctgtgggtat 331
Query: 234 cagggattcattttgcattgggacacagcagcgagatatcagtttggtgtgggtcagagt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagggattcattttgcattgggacacagcagcgagatatcagtttggtgtgggtcagagt 271
Query: 294 ggtcagcaggacatttgggatgaggatgaaggtgaggaggatgagtgaggg 344
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggtcagcaggacatttgggatgaggatgaaggtgaggaggatgagtgaggg 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
