Query= MSMg01no492_f13.b1 MSMg01no492_f13.b1 CHROMAT_FILE:
MSMg01no492_f13.b1 PHD_FILE: MSMg01no492_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:33 2005
(155 letters)
>mm_chr1_91419142_91419696
Length = 555
Score = 284 bits (147), Expect = 1e-81
Identities = 153/155 (98%)
Strand = Plus / Minus
Query: 1 aaaattactgttcctcctccatcaaatggctctacttccattcctgagacccacaggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaaattactgttcctcctccatcaaatggctctacttccattcctgagacccacaggaaa 296
Query: 61 ggagtcacagcagccagacctcattccaccccacccaccacaccccagcatgctccacag 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 295 ggagtcacagcagccagacctcattctaccccacccaccacaccccagcatgcttcacag 236
Query: 121 agaccctcaagctgctggctgcagtaacaaacccc 155
|||||||||||||||||||||||||||||||||||
Sbjct: 235 agaccctcaagctgctggctgcagtaacaaacccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no492_f13.g1 MSMg01no492_f13.g1 CHROMAT_FILE:
MSMg01no492_f13.g1 PHD_FILE: MSMg01no492_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:33 2005
(623 letters)
>mm_chr1_91278551_91279573
Length = 1023
Score = 1122 bits (580), Expect = 0.0
Identities = 616/634 (97%), Gaps = 12/634 (1%)
Strand = Plus / Plus
Query: 1 tctttctcgtggctttctctgcaggcaccagggaacatgatgtcccttcatcttctaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttctcgtggctttctctgcaggcaccagggaacatgatgtcccttcatcttctaggc 260
Query: 61 attgttgagtccaattacatgttaggaaataatagcaccaggaagtgtttgtcatgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgttgagtccaattacatgttaggaaataatagcaccaggaagtgtttgtcatgccag 320
Query: 121 ccctgctgtgatctgacccagatttggatgcctgagtgatgggcacactttgccatccca 180
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ccctgctgtgatctgatccagatttggatgcctgagtgatgcgcacactttgccatccca 380
Query: 181 gcccgaggcatcctcctccttgttggttctgggttgcctatgagcgtcaggggtcctgtc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gcccgaggcatcctcctccttgttggttctgggttgcctatgagcgtcaggggtcctgcc 440
Query: 241 tttagaagcaaaactaaaagcaagaaagatctatgctttccaaggtctgcaggcttcgag 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgagaagcaaaactaaaagcaagaaagatctatgctttccaaggtctgcaggcttcgag 500
Query: 301 ttccaaatcaagtgtctacagagcacacttcctgaaggttacaaggaagggtcctcctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccaaatcaagtgtctacagagcacacttcctgaaggttacaaggaagggtcctcctcc 560
Query: 361 tcctcct------tctttttcttc-----ccccccccccataagcacactacttattggc 409
||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 tcctcctcctccttctttttcttctccccccccccccccataagcacactacttattggc 620
Query: 410 catcctgacctaggacaacctcacctcaacttgatcacatctgcaaagaccctgtcccag 469
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catcctgacccaggacaacctcacctcaacttgatcacatctgcaaagaccctgtcccag 680
Query: 470 ataagaccacattaacaagtaaggacttccgcatgtgatttcagaggacatggttcaagt 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataagaccacattaacaagtaaggacttccgcatgtgatttcagaggacatggttcaagt 740
Query: 530 agtcacttttatcttttacagcccagggaggcctcgaattcacctatgtagctgaggatg 589
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 agtcacttttatcttttacagcccagggaggcctcgaattcac-tatgtagctgaggatg 799
Query: 590 gcttcaaactcttgatactcctaagtgctgggat 623
||||||||||||||||||||||||||||||||||
Sbjct: 800 gcttcaaactcttgatactcctaagtgctgggat 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
