Query= MSMg01no492_m02.b1 MSMg01no492_m02.b1 CHROMAT_FILE:
MSMg01no492_m02.b1 PHD_FILE: MSMg01no492_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:04 2005
(375 letters)
>mm_chr1_163626379_163627153
Length = 775
Score = 661 bits (342), Expect = 0.0
Identities = 366/374 (97%)
Strand = Plus / Plus
Query: 2 aactttcttcattccaggaaaggaaaatgtgtatactgtagcctcatagaggaacaaggc 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 aactttcttcattccaggaaaggaaaacgtgtatactgtagcctcatagaggaacaaggc 261
Query: 62 tcacaacaagttcatcacagtcttcccctgtggtctcccggctcggagcgcatctctttg 121
|||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 262 tcacaaaaagttcaacacattcttcccccgtggtctcccggctcggagcgcatctctttg 321
Query: 122 gaaaatgttattcattttataccacacttaatctggcatttagtgactgtataagagttt 181
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 322 gaaaatgttattcattttataccactcttaatctggcatttagtgactgtataagagttt 381
Query: 182 attatttataaataatggctacactttaacatgcataaaaccttacaaatattttttgta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attatttataaataatggctacactttaacatgcataaaaccttacaaatattttttgta 441
Query: 242 tgtattggtcctagtgccttaaaaatcaaggggacaagtacaagacagaaattgattata 301
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 442 tgtattggtcctagtgccttaaaaatcaaggggacaaatacaagacagaaattgataata 501
Query: 302 gtctcaagactgttacttctgtctaatatgctcagtaagtggtaatttaagttaacagaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtctcaagactgttacttctgtctaatatgctcagtaagtggtaatttaagttaacagaa 561
Query: 362 cactgatactttta 375
||||||||||||||
Sbjct: 562 cactgatactttta 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_m02.g1 MSMg01no492_m02.g1 CHROMAT_FILE:
MSMg01no492_m02.g1 PHD_FILE: MSMg01no492_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:04 2005
(398 letters)
>mm_chr1_163783172_163783970
Length = 799
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 1 tgatgttgggattcaaag-aaaaaagaataaaacataaaaccaacaaggctatattctca 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgatgttgggattcaaagaaaaaaagaataaaacataaaaccaacaaggctatattctca 288
Query: 60 tggtaaatctttatgttctgttattagacgtacctcaggaaatgtgaatttttattccag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggtaaatctttatgttctgttattagacgtacctcaggaaatgtgaatttttattccag 228
Query: 120 atgttttaaaacattttgaatttctagtttgttagttttgagatagaatctctgtatgta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atgttttaaaacattttgaatttctagtttgttagttttgagatagaatctctgtatgta 168
Query: 180 actttggttggccttaatgtaactgtgactacaaggctggcttcaaactcatgccaatcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 actttggttggccttaatgtaactgtgactacaaggctggcttcaaactcatgccaatcc 108
Query: 240 tttttgtgcggcatctcaaacgctgggattataagcatgtgccaccatgtctgccttgga 299
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 107 tctttgtgcggcatctcaaacgctgggattatgagcatgtgccaccatgtctgccttgga 48
Query: 300 tttctcatgtattttaaagctgtgtttttaggaattaaaacctgttc 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tttctcatgtattttaaagctgtgtttttaggaattaaaacctgttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 799
Length adjustment: 9
Effective length of query: 389
Effective length of database: 790
Effective search space: 307310
Effective search space used: 307310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
