TCCCGGGCGCGTGGGTGCTGGCGCCTATACGACTTACTATTTGGTGAGGA
TCCGCGGAATTCTTTGTTCACTTCTGAGCCCCATTTTTTAATGGGGTTAT
TTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATT
AGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGG
TGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGA
GTTTCATTAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATT
GCTGTTCCTGTTCAGGAATTTTTTCCCCTTGTGGCCCATATTCTTCAAGG
CTTTTCCCCACTTTTTCTCCTCTATAAGTTTCAAGTGGTCTCTTGGTTTT
TATGTGAAAGTTCCCTTTGAACCCCTTTAAATTTTGAACCCTTATTACCA
GGGAGAAAAAGTTATGGAATTCGATTTCTAAATTTCTTCTTTACCCAAAA
AACCAACCAGTTTTGGTGGCCCGCCCCCCAATTTGTTTGGAAAAATGGTG
TGTTTTTTTTTCTTTTCCCCTGGGGAGTGGGGTTTTAAGACTCTCCCCTT
TGGGCCGATAAAATCCAATGGTGACCTTTTGGGGGGGGTGGGGGGATCCA
ATTTTTTGTGGGCGTCTTCCATTTTTTCTATTCCCCTTTGGGGCCTCAAC
GGTGCTGGCGTTCTTTTACCCCAAAACCTTTGTGTTTTTTTTTTTATCCA
AATTTGCTTCTTGTATAAAAAAGACTTTTAAGGTTCTGTGCAGGGGTGTA
TTCTCCCCCAAAATATCTTTTTTTTTTTCCTTTAGAAAAATCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTAGTTTGAAATTACAGCTAA
CTACAGGTAAAGAATGTGACTGTGTGTGCCTGGATTCACTAGAGCCAAGG
ATAATAGAAAAAGCCAACCTATGACATTAAAACGTCTGCACCAATTACAG
CCATTGTGTCTGGGTTCAGCTCTCATTAGCAAGCCAGCCTTACTGAAGGA
TCTTTGTGTGTGGGCTTGTGTCCCAAGAGAGGGTCATAGAGCCAGCAAAC
CAGCTGGCATTGGCAGATGGCATCTGCGAATCTGAAGAAAGATCTCGATA
CTGAGGTTCTAACTTACCTGTGTGCTCACCTGTTGAGAAATGACTAAAAT
TGTGAGGAACGGATATCTGGCATTTTGTGGTGGCGCTGATCTTTGAAAAA
CAGTGCTCTGCATAATCTGATATCAACCGTTTCCCTGGATAGTGATGTCT
ATCTGGTAGACAATGCTTTTCCTAGTTCACAAAACTCTGGAGATGTGAAA
GACGAAAAAGGGGCAGTGAAGTAGGAAATAGAAAAATATTAACGTGTTCC
TTGGGCTGGGGAGATCATTGGGAAAGTATTTGCCTTGTAAGCCCAAGGAC
CCAAAGTCTACTCAGAGAAACAGCGGATGCAGCCTGCTCCTGCAGCTATC
ATGCTGTGACGGCGGAGATAGTCATATCCTTGCGGCTCA

Query= MSMg01no493_f08.g1 MSMg01no493_f08.g1 CHROMAT_FILE:
MSMg01no493_f08.g1 PHD_FILE: MSMg01no493_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:49 2005
         (587 letters)



>mm_chr1_188094964_188095950
          Length = 987

 Score = 1058 bits (547), Expect = 0.0
 Identities = 577/587 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttctagtttgaaattacagctaactacaggtaaagaatgtgactgtgtgtgcctggatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 cttctagtttgaaattacagctaactacaggtaaagaatgtgactgtgtgtgcctggatt 667

                                                                       
Query: 61  cactagagccaaggataatagaaaaagccaacctatgacattaaaacgtctgcaccaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cactagagccaaggataatagaaaaagccaacctatgacattaaaacgtctgcaccaatt 607

                                                                       
Query: 121 acagccattgtgtctgggttcagctctcattagcaagccagccttactgaaggatctttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 acagccattgtgtctgggttcagctctcattagcaagccagccttactgaaggatctttg 547

                                                                       
Query: 181 tgtgtgggcttgtgtcccaagagagggtcatagagccagcaaaccagctggcattggcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtgtgggcttgtgtcccaagagagggtcatagagccagcaaaccagctggcattggcag 487

                                                                       
Query: 241 atggcatctgcgaatctgaagaaagatctcgatactgaggttctaacttacctgtgtgct 300
           |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 486 atggtatctgcgaatctgaagaaagatctcaatactgaggttctaacttacctgtgtgct 427

                                                                       
Query: 301 cacctgttgagaaatgactaaaattgtgaggaacggatatctggcattttgtggtggcgc 360
           |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |
Sbjct: 426 cacctgttgagaaatgactaaacttgtgaggaatgggtatctggcattttgtggtggcac 367

                                                                       
Query: 361 tgatctttgaaaaacagtgctctgcataatctgatatcaaccgtttccctggatagtgat 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 366 tgatctttgaaaaacagtgctctgcataatctgatatcaactgtttccctggatagtgat 307

                                                                       
Query: 421 gtctatctggtagacaatgcttttcctagttcacaaaactctggagatgtgaaagacgaa 480
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtctatctggtagacaatgctcttcctagttcacaaaactctggagatgtgaaagacgaa 247

                                                                       
Query: 481 aaaggggcagtgaagtaggaaatagaaaaatattaacgtgttccttgggctggggagatc 540
           ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaaggggcaatgaagtaggaaagagaaaaatattaacgtgttccttgggctggggagatc 187

                                                          
Query: 541 attgggaaagtatttgccttgtaagcccaaggacccaaagtctactc 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 attgggaaagtatttgccttgtaagcccaaggacccaaagtctactc 140


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)