XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
GGTTCACAACAGCCAGGAAACCCATCAAAGTTCTTTAAGGATGACAGGTT
TTTTACTTAAAAAATTAAATAAATAAAAAATAAAAACCAAACCAAAACAA
AAAACCCAAGACCAATCTGAGGAGAGAGGTTAAGTTTCAGACTCAAACTA
ACACAGCAGGGCATCTTGCCCCTCCCCCCTTCCAAGGAGGAGCCCAGCCC
CACTACAAAGGGTGCTAAGAATACATTTAACAAAAACATATATAGAATCT
GTGTGAGGATAAAACAGGAAGCCGACTGATGAAGGACAGGAAGGAGTATG
AGACTGAGTGGAGAGAGACTGGATGTTCTTGCTATGACAACGAATTCTAT
AAGGACTTTTGAGTTCTCTACAAATCCACTGGCAAGCATAGTACACAAAT
TCCACTGGCTTTGTCATGAGAACTTAAGTTGGATGTTGTTGTTGTTTGGG
TTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTTTCTATTTGGGAGGCTA
GATGTTTAGAAATTTCCAGAAACTTTTTGGGAAACAAGTAATAGTAATTC
AATTTGCCTACGATGTGAGAGATTGTTTGATTAAGGTGTAACTATAGAAA
TTGTCCTGGTCTCTGTGCTTCTGATCTCAGAATAAACAGGCNAAGAATAG
AAGAGCCCTTCAATAGAAGAGCCCCA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTCCTGTCAAAAGGAAATGCAGGAACAAAGAATGG
AGCAGAGACTGAAGGAAAGGCCATCCAGAGACTGCCCCACCTGGTGATCC
ATCCCACATGCAGACACTAAACCCAGACACTATTGCTGATGCCAAGAGCT
TGCTACAGAAGCCTGGTATAGCTGTCCCCTGAGAGGCTCTATCAGACACT
GACCAATACAGATGCAGATGTATGCAGCCAAACATTGGCCTGAGTGTGGG
GTCTCCAATGGAGGATTTAGAGCAAGAGCTAAAGGAGATGAAGGGGATTT
ATAACCCCAAAGGAAGAACAACAATACCAACAAACCAGACCCGCCCCCAA
GGCCCCAGGAACTAAATCACCAACCACAGAGTAGACATCAAGGGATCCAT
GGCTGCACCTGCATATGTGGCAGAGGATGGTCTTATCTGACATCAGTGGG
AGGGGAGGCTCTTGGTCCTGTGGAGGCTCTATGACACAGCATAGGGGAAT
GCTAAGGTGCTGTGTGGGAATGGGTAGGCAGGTGGTGGAGCACCCTCATA
AAGGAAAGGGTGGGGGAGGGGATAAAGAGTTTTTTTTTNTTTTTTTTTTA
TTTTGTGGTTGTTTTTTGGTTTGTTATGTTTTTTTTTTGTTGGACTTTGT
CTTTTTTTAG

Query= MSMg01no494_d15.b1 MSMg01no494_d15.b1 CHROMAT_FILE:
MSMg01no494_d15.b1 PHD_FILE: MSMg01no494_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:01 2005
         (619 letters)



>mm_chr1_69776032_69777050
          Length = 1019

 Score = 1073 bits (555), Expect = 0.0
 Identities = 603/627 (96%), Gaps = 15/627 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaggttcacaacagccaggaaacccatcaaagttctttaaggatgacaggttt 64
           |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaattctcaggaacaaaacagccaggaaacccatcaaagttctttaaggatgacaggttt 255

                                                                       
Query: 65  tttacttaaaaaattaaataaataaaaaa--taaaaaccaaaccaaaacaaaaaacccaa 122
           ||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||||||
Sbjct: 256 tttacttaaaaaaataattaaataaaaaaaataaaaaccaaaccaaaacaaaaaacccaa 315

                                                                       
Query: 123 gaccaatctgaggagagaggttaagtttcagactcaaactaacacagcagggcatcttgc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaccaatctgaggagagaggttaagtttcagactcaaactaacacagcagggcatcttgc 375

                                                                       
Query: 183 ccctccccccttccaaggaggagcccagccccactacaaagggtgctaagaatacattta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccctccccccttccaaggaggagcccagccccactacaaagggtgctaagaatacattta 435

                                                                       
Query: 243 acaaaaacatatatagaatctgtgtgaggataaaacaggaagccgactgatgaaggacag 302
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 436 acaaaaacatatatagaatctgtgtgaggataaaacaggaagccaactgatgaaggacag 495

                                                                       
Query: 303 gaaggagtatgagactgagtggagagagactggatgttcttgctatgacaacgaattcta 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaaggagtatgagactgagtggagagagactggatgttcttgctatgacaacgaattcta 555

                                                                       
Query: 363 taaggacttttgagttctctacaaatccactggcaagcatagtacacaaattccactggc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 taaggacttttgagttctctacaaatccactggcaagcatagtacacaaattccactggc 615

                                                                       
Query: 423 tttgtcatgagaacttaagttggatgttgttgttgtttgggtttttttgttttgttttgt 482
           |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||
Sbjct: 616 tttgtcatgagaacttaagttgg---ttgttgttgtttgggtttttttgttttgttttgt 672

                                                                       
Query: 483 tttgtttt----------tgttttttctatttgggaggctagatgtttagaaatttccag 532
           ||||||||          |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 673 tttgttttgttttgtttttgttttttctatttggaaggctagatgtttagaaatttccag 732

                                                                       
Query: 533 aaactttttgggaaacaagtaatagtaattcaatttgcctacgatgtgagagattgtttg 592
           ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaactttctgggaaacaagtaatggtaattcaatttgcctacgatgtgagagattgtttg 792

                                      
Query: 593 attaaggtgtaactatagaaattgtcc 619
           |||||||||||||||||||||||||||
Sbjct: 793 attaaggtgtaactatagaaattgtcc 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)