XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
TTTCGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTC
CACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATT
TAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTAGCCTTTTTGTCTTG
TTGACAGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCATGAGGTCCCA
TTTGTCAATACATTCTGACTGTTCTATTCTTTCCTCTCTCCTGTCCTAGT
CCAGTCTGCTCACCACGTTCATTCTGTTGTATTCTCTGCTCCAGAATCTT
CCAGAAGCCTATGGCTATTCTTTTTATCATATCCACAATAAAAGTTTTCT
GCTTAGCTATGGACCTTGGAATGATCCTGTTGTCAATTTACACATTCCTA
TCTCAGCTTTCTGAGTAAATCACATTACAGGAATACACCAGGATTTCAAG
GTCTCTCTCAAAGTTTTTCAGGTCAAAATTGTTTAATATAGGTGGCAGTG
GAGTATCTTAGAGAAAAGGTAAAACCACAATAGAAAATACGTGAATTGTT
TTTCACTTATATTCATAGGATCCAAATAAATGTTTCCAAAGAGAAATCAT
CAGAGGTGGAAGAATTCAGCCAAGTTTTACAGGTAAAAAAAAAATTATAC
TCTTTTGACTTGATCTATGG

TGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACT
TGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACA
ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC
AGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCC
ATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGG
CGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACC
TCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACAT
GCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAA
GAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT
CTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAAT
TCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACA
CATTCACAAAGAAACTCACACAATATATATTCACTGATAAGTGGATATTA
GCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACAT
GAAACTCAAGAAGAATGAA

Query= MSMg01no494_d16.b1 MSMg01no494_d16.b1 CHROMAT_FILE:
MSMg01no494_d16.b1 PHD_FILE: MSMg01no494_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:01 2005
         (628 letters)



>mm_chr1_106926455_106927482
          Length = 1028

 Score = 1131 bits (585), Expect = 0.0
 Identities = 600/605 (99%)
 Strand = Plus / Minus

                                                                        
Query: 24   gagccccattttttaatggggttatttgattttctggagtccaccttcttgagttcttta 83
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1028 gagccccattttttaatggggttatttgattttctggagtctaccttcttgagttcttta 969

                                                                        
Query: 84   tatatgttggatattagtcccctatctgatttaggataggtaaagatcctttcccaatct 143
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968  tatatattggatattagtcccctatctgatttaggataggtaaagatcctttcccaatct 909

                                                                        
Query: 144  gttggtagcctttttgtcttgttgacagtgtcttttgccttgcagaagctttgcagtttc 203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908  gttggtagcctttttgtcttgttgacagtgtcttttgccttgcagaagctttgcagtttc 849

                                                                        
Query: 204  atgaggtcccatttgtcaatacattctgactgttctattctttcctctctcctgtcctag 263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848  atgaggtcccatttgtcaatacattctgactgttctattctttcctctctcctgtcctag 789

                                                                        
Query: 264  tccagtctgctcaccacgttcattctgttgtattctctgctccagaatcttccagaagcc 323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788  tccagtctgctcaccacgttcattctgttgtattctctgctccagaatcttccagaagcc 729

                                                                        
Query: 324  tatggctattctttttatcatatccacaataaaagttttctgcttagctatggaccttgg 383
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 728  tatggctattctttttatcatatccacaataaaagctttctgcttagctatggaccttgg 669

                                                                        
Query: 384  aatgatcctgttgtcaatttacacattcctatctcagctttctgagtaaatcacattaca 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668  aatgatcctgttgtcaatttacacattcctatctcagctttctgagtaaatcacattaca 609

                                                                        
Query: 444  ggaatacaccaggatttcaaggtctctctcaaagtttttcaggtcaaaattgtttaatat 503
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 608  ggaatacaccaggatttcaaggtctttctcaaagtttttcaggtcaaaattgtttaatat 549

                                                                        
Query: 504  aggtggcagtggagtatcttagagaaaaggtaaaaccacaatagaaaatacgtgaattgt 563
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 548  aggtggcagtggagtatcttagagaataggtaaaaccacaatagaaaatacgtgaattgt 489

                                                                        
Query: 564  ttttcacttatattcataggatccaaataaatgtttccaaagagaaatcatcagaggtgg 623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488  ttttcacttatattcataggatccaaataaatgtttccaaagagaaatcatcagaggtgg 429

                 
Query: 624  aagaa 628
            |||||
Sbjct: 428  aagaa 424


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)