Query= MSMg01no494_l19.b1 MSMg01no494_l19.b1 CHROMAT_FILE:
MSMg01no494_l19.b1 PHD_FILE: MSMg01no494_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:39 2005
(509 letters)
>mm_chr1_70589523_70590431
Length = 909
Score = 913 bits (472), Expect = 0.0
Identities = 476/478 (99%), Gaps = 2/478 (0%)
Strand = Plus / Minus
Query: 32 ggagtggttgttggtcattcagggagctggtttaatttgttagtagttctgtttaaagaa 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 ggagtggttgttggtcattcagggagctggtttaatttgttagtagttctgtttaaagaa 850
Query: 92 gaaaccagaaaaaaatggattcaaagaactctctctctctcctctatccttctttctctc 151
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 849 gaaaccagaaaaaaatggattcaaagaa--ctctctctctcctctatccttctttctctc 792
Query: 152 tcaactagtgatagggtatgaaaccagggggaagaaagggtaggaaaagaaagaaaccac 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcaactagtgatagggtatgaaaccagggggaagaaagggtaggaaaagaaagaaaccac 732
Query: 212 atagtagtaaagaccagatacatttcctctttgtaagtacccttctagcaacacaggcat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atagtagtaaagaccagatacatttcctctttgtaagtacccttctagcaacacaggcat 672
Query: 272 acacatttcaggggatgtttctcaaaacttgaaaaaatttttagctgtgagttgatgttg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 acacatttcaggggatgtttctcaaaacttgaaaaaatttttagctgtgagttgatgttg 612
Query: 332 ttgtagatgtctagttggtagagatcagaaattttgttaagccttatgcagtgcatatga 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgtagatgtctagttggtagagatcagaaattttgttaagccttatgcagtgcatatga 552
Query: 392 tccatgcattgaaaagtcaagatatcagttctattgccagggttaagaaatatgtcagaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tccatgcattgaaaagtcaagatatcagttctattgccagggttaagaaatatgtcagaa 492
Query: 452 agtgtagtcattagatgagaaatggccccaatgggcttatagatctgaattaattatt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agtgtagtcattagatgagaaatggccccaatgggcttatagatctgaattaattatt 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_l19.g1 MSMg01no494_l19.g1 CHROMAT_FILE:
MSMg01no494_l19.g1 PHD_FILE: MSMg01no494_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:39 2005
(679 letters)
>mm_chr1_70521684_70522762
Length = 1079
Score = 1290 bits (667), Expect = 0.0
Identities = 676/679 (99%)
Strand = Plus / Plus
Query: 1 ttctacattttgttgctaactctcctttaaagtggtcattcaagactctaagtccctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctacattttgttgctaactctcctttaaagtggtcattcaagactctaagtccctttg 260
Query: 61 tgccctctagagctgcaacagaaacctgatgctcttccccatagatggtgttctcattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccctctagagctgcaacagaaacctgatgctcttccccatagatggtgttctcattcc 320
Query: 121 cttccttccaccgtcattactcagagaatataaaaggactggcttcctccctagataaag 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccttccaccttcattactcagagaatataaaaggactggcttcctccctagataaag 380
Query: 181 gacaacagactaatgaatttaagtgcttgcatcattaaaattgtcacccctggtatacta 240
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 381 gacaacagactaatgaatttaagtgcctacatcattaaaattgtcacccctggtatacta 440
Query: 241 tttcaagtgtggtaccaagggtggctagcttttactcttcagggggtacagtgatcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcaagtgtggtaccaagggtggctagcttttactcttcagggggtacagtgatcttca 500
Query: 301 gtttcttatgtaaatttatgcaaaaaccgctccaacaaaatcacatgctatttatttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttcttatgtaaatttatgcaaaaaccgctccaacaaaatcacatgctatttatttcaa 560
Query: 361 gcctcaaaaggaatgcttcatttcctggtttggtaatggaaggagctggagtggagaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctcaaaaggaatgcttcatttcctggtttggtaatggaaggagctggagtggagaggg 620
Query: 421 gtgagctgagttacaggttaacaaatagaatatttgtccattcagagagggagcaagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgagctgagttacaggttaacaaatagaatatttgtccattcagagagggagcaagttt 680
Query: 481 ggggagaaagcataatggcacacttttcagttgtgtggtatcagattttatcacagatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggggagaaagcataatggcacacttttcagttgtgtggtatcagattttatcacagatct 740
Query: 541 actgcatctacaaacaccttaatgtttcagggtaatacatgtcgtctagcttgggaggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actgcatctacaaacaccttaatgtttcagggtaatacatgtcgtctagcttgggaggtt 800
Query: 601 tgctcattagcttgctcaagatgatcccactactactccataaagtctaagaccatgtct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgctcattagcttgctcaagatgatcccactactactccataaagtctaagaccatgtct 860
Query: 661 cattccttcctaattgtat 679
|||||||||||||||||||
Sbjct: 861 cattccttcctaattgtat 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
