This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-496D14
Chromosome
1 (Build37)
Map Location
118,771,469 - 118,772,048
singlet/doublet
singlet
Overlap gene
none
Upstream gene
Cntnap5a
Downstream gene
B020011L13Rik
,
LOC100041684
,
LOC636972
Link
Open Mouse BAC browser
Click to get alignment info.
name
Cntnap5a
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:636808
MGI:3643623
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
B020011L13Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:547097
MGI:3588191
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs
name
LOC100041684
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041684
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC636972
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:636972
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
Cntnap5a
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:116734826
GeneID:636808
MGI:3643623
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: contactin associated protein-like 5A
transcript_id
: NM_001077425.1
name
B020011L13Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94363901
GeneID:547097
MGI:3588191
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs
product
: RIKEN cDNA B020011L13 gene, transcript variant 1
transcript_id
: XM_488281.4
name
Cntnap5a
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:116734827
GeneID:636808
MGI:3643623
definition
GO_function
: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO_process
: GO:0007155 - cell adhesion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
codon_start
: 1
note
: contactin associated protein-like 5-1
product
: contactin associated protein-like 5A
protein_id
: NP_001070893.1
name
B020011L13Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:82882344
GeneID:547097
MGI:3588191
definition
codon_start
: 1
product
: similar to mKIAA1611 protein isoform 1
protein_id
: XP_488281.3
name
LOC100041684
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041684
definition
number
: 1
pseudo
: _no_value
name
LOC100041684
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041684
definition
number
: 2
pseudo
: _no_value
name
LOC100041684
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041684
definition
number
: 3
pseudo
: _no_value
name
LOC100041684
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041684
definition
number
: 4
pseudo
: _no_value
name
LOC100041684
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041684
definition
number
: 5
pseudo
: _no_value
name
LOC636972
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:636972
definition
number
: 1
pseudo
: _no_value
name
LOC636972
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:636972
definition
number
: 2
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:186240
definition
standard_name
: M-08387
name
(CDS detail)
type
STS
link
xref
UniSTS:128527
definition
standard_name
: D1Mit188
name
(CDS detail)
type
STS
link
xref
UniSTS:128698
definition
standard_name
: D1Mit340
name
(CDS detail)
type
STS
link
xref
UniSTS:128668
definition
standard_name
: D1Mit310
name
(CDS detail)
type
STS
link
xref
UniSTS:131894
definition
standard_name
: D9Mit333
name
(CDS detail)
type
STS
link
xref
UniSTS:131895
definition
standard_name
: D9Mit333.1
name
(CDS detail)
type
STS
link
xref
UniSTS:179548
definition
standard_name
: AW490662
name
(CDS detail)
type
STS
link
xref
UniSTS:122795
definition
standard_name
: 04.MMHAP9FRB7.seq
clone name
MSMg01-483E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-097G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-381G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-179C17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-176J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-205A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-546P12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-113E08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-205B09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-519J16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-404H22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158C09
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-053J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192M04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-487I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-269B14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-173A18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139P18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-424G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327G02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089D01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-172M24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389O17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-410N02
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-534N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-411D21
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-176C13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-274M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324I21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-542C19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125L03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-197E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-495I05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495G09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-309B15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-142M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-113F20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-388L22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159B20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-196M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-404M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-537G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-341O15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-523I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-523K16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-066D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-364D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412C22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-411D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-509C02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-160L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-161L23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173J08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-358F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065P04
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-101O15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-060K05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-402D12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-202P18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-515N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-338G24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-153J24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-526O24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-464F01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346J11
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-070B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-524L01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-373F13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-469F06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-318L01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-461F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446C03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-048G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-099O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290E24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-068B02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-249A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-045D17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-075I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188K01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003H12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-122J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126D05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-018C03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-194N01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101C20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-108D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-277B05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076E04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-177P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-241M03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-244K11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-041H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281A20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-319P16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-277I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294E19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-320D09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-145M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021D23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136I24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-020J21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-245M09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-211O11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-093G24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-195G07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-098L19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-263K24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-348D12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-116A14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-194B24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-188A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-039N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021H07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-269L23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-324F12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-345K24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-190B24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-017I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185J05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-156I17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008A17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-247K11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-305D06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-347F16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284E07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-158B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180D19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-281D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318A04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340H21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-176N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202B14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-235O07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-318C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-083A12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128P23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-303C15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-084J05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-178G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-257M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-025G16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-005J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249L12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-011J15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-133K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-055J24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095G22
singlet/doublet
singlet
plural/unique
unique