Query= MSMg01no498_g04.b1 MSMg01no498_g04.b1 CHROMAT_FILE:
MSMg01no498_g04.b1 PHD_FILE: MSMg01no498_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:23 2005
(607 letters)
>mm_chr1_131605646_131606652
Length = 1007
Score = 1038 bits (537), Expect = 0.0
Identities = 580/605 (95%), Gaps = 18/605 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagaacctttactgtatgtctataaacttggtcactatatggtaactcatttta 63
||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 220 ggaattcagaaccctcactgtatgtctataaacttggtcactatatggtaattcatttta 279
Query: 64 aatttgtcattattttaattatttatttttt-tgtgttatctgaatatgtctgtgtggag 122
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 280 aatttgtcattattttaattatttattttttgtgtgttatctgaatatgtctgtgtggag 339
Query: 123 gccagtattcaatatatgtatattattcctcagaagtcttattttttaagacagagtctc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gccagtattcaatatatgtatattattcctcagaagtcttattttttaagacagagtctc 399
Query: 183 tcattggctcttgaggctcacctatttattagggctgactggccaacaagcacagggagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcattggctcttgaggctcacctatttattagggctgactggccaacaagcacagggagt 459
Query: 243 cccggcatctcttcctcttccacactagtgacactaggtgtacagttgccaccacaccca 302
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 460 cccggcatctcttcctcttccacactagt-----------------tgccaccacaccca 502
Query: 303 tcgttgcaagcaggtgctgggaccaaactgaggtattcaagtttgggtggcaagtatcta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcgttgcaagcaggtgctgggaccaaactgaggtattcaagtttgggtggcaagtatcta 562
Query: 363 acagactgtgccccagctcttaaagtcagtttttagaaagctgtgacactggaaacagaa 422
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 563 acagactgtgccccagctcttaaagtcagattttagaaagctgtgacactggaaacagaa 622
Query: 423 gcagaaaaccaacaacaaaaacaataaaaaaaaacattaaaaagcatactgttatatcca 482
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcagaaaaccaaaaacaaaaacaataaaaaaaaacattaaaaagcatactgttatatcca 682
Query: 483 aatttgaggatcaggaatgactctagaagctattgaaggtgctatcctactttactgaca 542
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 683 aatttgaggatcaggaatgactctagaagctattgaaggtgctttcctactttactgaca 742
Query: 543 ctcaatgacaaacatgtcgcctgggtttctataaacagaatacatttccaggatggtggt 602
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 743 ctcaatgacaaacatgtcgcctggttttctataaacagaatacatttccaggatggtggt 802
Query: 603 gctgt 607
|||||
Sbjct: 803 gctgt 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_g04.g1 MSMg01no498_g04.g1 CHROMAT_FILE:
MSMg01no498_g04.g1 PHD_FILE: MSMg01no498_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:23 2005
(620 letters)
>mm_chr1_131757487_131758506
Length = 1020
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Minus
Query: 186 taggttgaaggaaagaggaattaggagaaacgcagatgaatatcgatactcctctgtgtc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taggttgaaggaaagaggaattaggagaaacgcagatgaatatcgatactcctctgtgtc 961
Query: 246 tgtctcctggccagagataaagatggagaaattcccgttgctgtgtcttccctgtcagca 305
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tgcctcctggccagagataaagatggagaaattcccgttgctgtgtcttccctgtcagca 901
Query: 306 ttctctggagggtgaaccaaaataagcccttactctcttatgtttcatctgcctactatt 365
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 900 ttctctggagggtgaaccaaaataagcccttactctcttatgttttatctgcctactatt 841
Query: 366 agatcatacaaatgagaaaaaaacaacaacaacagatatgcttagtaatagaagaagacc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 agatcatacaaatgagaaaaaaacaacaacaacagatatgcttagtaatagaagaagacc 781
Query: 426 tatgcaactctattcagtgcattgggcgaggtcattacaaattgccctcaggggaaatta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tatgcaactctattcagtgcattgggcgaggtcattacaaattgccctcaggggaaatta 721
Query: 486 aaatgttgattaattcaatattaacacagaactaataaaataatagtggtatgattttat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aaatgttgattaattcaatattaacacagaactaataaaataatagtggtatgattttat 661
Query: 546 ggtcttcattatgttaacagacattttctaattgaacctgataataagcataataaatat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggtcttcattatgttaacagacattttctaattgaacctgataataagcataataaatat 601
Query: 606 gtatataacaacaat 620
|||||||||||||||
Sbjct: 600 gtatataacaacaat 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
