Query= MSMg01no498_k07.b1 MSMg01no498_k07.b1 CHROMAT_FILE:
MSMg01no498_k07.b1 PHD_FILE: MSMg01no498_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:46 2005
(569 letters)
>mm_chr1_91940258_91941222
Length = 965
Score = 1042 bits (539), Expect = 0.0
Identities = 560/569 (98%), Gaps = 4/569 (0%)
Strand = Plus / Plus
Query: 1 ccctttaacttgtcttctgtaggttttaatttcaattttgcagattttatctgttttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctttaacttgtcttctgtaggttttaatttcaattttgcagattttatctgttttgct 260
Query: 61 tttctgtgatgccttcttgggggaactctctagggccaatttctagttccatggtttgct 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 tttctgtgatgccttcttgggggaactccctagggccaatttctagttccatggtttgct 320
Query: 121 ctttgaccttacatagtctagagttcatacttctcttagttttaatttaattaactacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgaccttacatagtctagagttcatacttctcttagttttaatttaattaactacta 380
Query: 181 ttttttcatttaaaagttttgttttgtggttttaaaagataattatgtcatttcatttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttttttcatttaaaagttttgttttgtggttttaaaagataattatgtcatttaatttag 440
Query: 241 tgttttttttttatgtttcaaaggttcatttctagtgggagtcatattttcgcttatttt 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttttt----atgtttcaaaggttcatttctagtgggagtcatattttcgcttatttt 496
Query: 301 cttgaacatgaaattatatgtattcaaagcactttattctttttttataatttaaaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 497 cttgaacatgaaattatatgtattcaaagcactttattctttttttacaatttaaaaatt 556
Query: 361 atgttttgaggctgtaatatgattataccacttaccccttcttttcctagctccaaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgttttgaggctgtaatatgattataccacttaccccttcttttcctagctccaaacct 616
Query: 421 tcctacataacttttgcaaatttctcaaatcactacttagagctgcatacttgggatgtc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcctacataccttttgcaaatttctcaaatcactacttagagctgcatacttgggatgtc 676
Query: 481 acagttctgggacggtcgcactggtttaggtcatggcatgggtagggctgtgtgcctccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acagttctgggacggtcgcactggtttaggtcatggcatgggtagggctgtgtgcctccc 736
Query: 541 agagtccccagaggagaggctgttctttg 569
||||||||||||||||||||| |||||||
Sbjct: 737 agagtccccagaggagaggctattctttg 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 965
Length adjustment: 10
Effective length of query: 559
Effective length of database: 955
Effective search space: 533845
Effective search space used: 533845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_k07.g1 MSMg01no498_k07.g1 CHROMAT_FILE:
MSMg01no498_k07.g1 PHD_FILE: MSMg01no498_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:46 2005
(245 letters)
>mm_chr1_92071040_92071684
Length = 645
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 aaggttaaagtccagatgtgacggtgcaccccgggaccaggccccctcgcactagcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaggttaaagtccagatgtgacggtgcaccccgggaccaggccccctcgcactagcaaaa 384
Query: 61 cggagacatgatctgtttatattgatttttcacactaaagaggggaaacaaacaaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cggagacatgatctgtttatattgatttttcacactaaagaggggaaacaaacaaacagg 324
Query: 121 tctttaactcaaaacctgttacgagttttctataggaataattttcaaaagctccattct 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctttaactcaaaacctgttaggagttttctataggaataattttcaaaagctccattct 264
Query: 181 tctctgagaagtgtgtttcggcaataatgctttctctgaaggctatttttagtttcctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctctgagaagtgtgtttcggcaataatgctttctctgaaggctatttttagtttcctac 204
Query: 241 ctg 243
|||
Sbjct: 203 ctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
