XXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGAATTCTCAAC
TTTGCCTACCGAACGGTGGAGAAGCAGCTAACTTTACCTTTTCAAATCAT
TTATCTCTAACATTATGCGAGTGGGAGTTGTATTCTTTCTACAGTACGGA
GAGCCTTAACTGGTAATCTAATGCAAAGATGTTGACACATGCAGTACTGA
TCAGATTCAGCAATATAGGGGTGTGTGTGTGTGTCTTTGTGTGTCTGTGT
GTATAGGTGTGTGTGTGTGAGTCTTTGTGTGTTTGTGTGTGTACAGGTGT
GTCTGTGTGTATAGGTGTGTGTGTGTGTCTGTGTGTGTATAGGTGTGTGT
GTGNTTGTTNTTTTTTTTTTTTTTTTGTTTTTTGTTTTTNTTGTGGGTTT
TTTTGTTTGTTCTGTTTTTTTGTTTGTTTTGTTTTTTTTGTGTTTTTTTT
TGGGTTTTTTTTTTTTTTTGTGTGTTTGTTTTTGTGTTTTTTTTTTTTTG
TGGTTTTTTTTGCGCTTTGTTTTTGTTTGTTTGTNGTTTTTGTTTTTTTT
TTTTTTTTTGTTTTTTTGTTTTNTTTGTGNTTTTTTTTTTTTTTTTGTGT
TTTTTGGGTTTTTTGTTTCGGTTGTTTTTTTTTTCTTTTTGTTGTCCCCT
TTTGTTTCCCTTGCCTTTCTTTCCTCTTTGCTCCTCGTTCTTTCTTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCAAGCAAATCTGGTGCTCATGATCTACTGCCTGAGCTTCCA
GAATATTGAAATTACACATTTCAATACAGGCATCATCATCCCTGACTTAT
ATGTTTCTGATGATGATAATAATGATGATCATGATGATGATGTTCATGAT
AATAATAATAAACTCTTAATAGGTAAGATGCCCATGTTCCAGTGGATGCT
CCTAACCAATACCCTGATTGCACTAAGTTAGTCTATAAATGTATGAATAT
TCAGAAAATAAAACAAATATGACTTAAAATTTGCTACTTGGGATTTTCAT
AATTTGATAGGTTTAAAAATGTTTTATGCTTTTAGATCAATACTCATGTC
AAATGATTCCTGACTATTCTTAATGAATTCCAGATGGTTCTGGAGCTGAA
AAGTATTTTGATGAGATCATTTATGGATTAGCTCCCTTAAAAGATATGGC
AGTGCAGCACTCAGCCTGATATCTCCCAGGCTGACCCTGCCTCCACCAGT
GTCACTTGACCTTCTTCTCTCTGCCACCCCATGACCTCCATTTTAATTGG
GTTTTTAGCCCTGACAACAGACATCTGTTTCACAATCTGCCATAATCTCA
GAGATATGTGCCCTTTACTGATCACATCTAAAGCTC

Query= MSMg01no500_f22.g1 MSMg01no500_f22.g1 CHROMAT_FILE:
MSMg01no500_f22.g1 PHD_FILE: MSMg01no500_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:59 2005
         (540 letters)



>mm_chr1_150811961_150812899
          Length = 939

 Score =  899 bits (465), Expect = 0.0
 Identities = 522/541 (96%), Gaps = 3/541 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagcaaatctggtgctcatgatctactgcctgagcttccagaatattgaaattacacatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcaaatctggtgctcatgatctactgcctgagcttccagaatattgaaattacacatt 260

                                                                       
Query: 61  tcaatacaggcatcatcatccctgacttatatgtttctgatgatgataataatgatgatc 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaatataggcatcatcatccctgacttatatgtttctgatgatgataataatgatgatc 320

                                                                       
Query: 121 atgatgatgatgttcatgataataataataaactcttaataggtaagatgcccatgttcc 180
           |||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |
Sbjct: 321 atgatgatgatggtcatgataataataatgaactcttaatagataagatgcccatgttac 380

                                                                       
Query: 181 agtggatgctcctaaccaataccctgattgcactaagttagtctataaatgtatgaatat 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggatactcctaaccaataccctgattgcactaagttagtctataaatgtatgaatat 440

                                                                       
Query: 241 tcagaaaataaaacaaatatgacttaaaatttgctacttgggattttcataatttgatag 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagaaaataaaacaaatataacttaaaatttgctacttgggattttcataatttgatag 500

                                                                       
Query: 301 gtttaaaaatgttttatgcttttagatcaatactcatgtcaaatgattcctgactattct 360
           ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 501 gtttaaaaatggtttattcttttagatcaatactcatggcaaatgattcctgaatattct 560

                                                                       
Query: 361 taatgaattccagatggttctggagctgaaaagtattttgatgagatcatttatggatta 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 taatgaattccagatggttctggagctgaaaagtattt-gatgagatcatttatggatta 619

                                                                       
Query: 421 gctcccttaaaagatatggcagtgcagcact-cagcctgatatctcccaggctgaccctg 479
           |||||||| |||||||||||||||||||| | |||||||||||||  |||||||||||||
Sbjct: 620 gctccctttaaagatatggcagtgcagca-tgcagcctgatatctgtcaggctgaccctg 678

                                                                       
Query: 480 cctccaccagtgtcacttgaccttcttctctctgccaccccatgacctccattttaattg 539
           ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 679 cctccaccagtgtcacttgaccttcctctctctgtcaccccatgacctccattttaattg 738

            
Query: 540 g 540
           |
Sbjct: 739 g 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 939
Length adjustment: 10
Effective length of query: 530
Effective length of database: 929
Effective search space:   492370
Effective search space used:   492370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)