GCGGCCGCTAAACGACTCACATAGTTCGGATTAGGCGGAATTCTCACCTG
AGGTACAACAAAGGCTGAGACCTACCTGAAATCTTCCTTCTTATCTATAC
CTATTGTCCTTAGTTTTGGTCTTCTCACAGTGTCCTCGATTTCCTGGATG
CCTTGTGTTAGGATCTTTTTGCATTTCACATTTTCTTTGATTGTTGGGTC
AATGTTTTCTATGGTATCTTCTGCACCTGAGATTCTCTCTCCTATCTCTT
GTATTCTGTTAGTTATGCTTCCATCAATGGCTCCTGACTTCTTTTCTAGG
TTTTGTGATTTTTTTANTGTTTCTATTTCCATTTTTAGATCCTGGATGGT
TTTGTTCAATTCTTTCTCCTGATTGGATGTATTCTCCTGTATTTTTTTAA
TTAGGTATTTTCTTCACTTACATTTCTAATGCTATCCCAAAAGTCCCCCA
TTCCCTCCCCCACACTCCCCTTCCCACACACTCCCAGTTCTTGGCCCTGG
CATTCTCCTGTATTGAAGCATATAAAGTTTGCAAGTCCAATGGGCCTCTC
TTTCCAATGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTAGAG
ACATGAGCTCTGGGGGCACTGGGTAGTTCATATTGTTGTTCCCCTATAGG
GGTGTTTATTTCTTTAACTCCCTGGGTTCTTCCTCTAGCTCCTCCATTTG
GGAGCCCTGTGATCCCTCCAATAGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAAAACTTTGTGTGGACATGTATATATTTGTTCC
TGTGTACGTGCATGTGTGGGTGGGTTCAGATACATACACATGTGTGGGAA
TATACATGTGGAAGTCAGAAGTTTACACTGAATGACATCCTCAACTTCCT
GACACTTGAGCTTTTGGGATAGGGCCCTTTGCTGAACTTTGACTCAGCTG
TACTGACTGGCCAGCAGCTTGGAGGGGTCCTCCTGGCTCTGCCTTCCCAG
TGCTGAATTTCAGGAGTATATGTTATTTTTAGGTTTTGAGGTCAGCTCTG
GGGATTCGACTCAGGTCCAGATCTTGTATGGCAAGTACTTTAACCACCAA
GCCATCTCTCAAGCCCTAGGAACATTTTTAAAAGCCATCTCATTTATTGT
CTAGGGTGCTCCACTTCTCAAGTTCATTTGTTGAAAACATATTACTGAAA
TTAAGTCTTATTCATAAATCTCTTTTTTTTTTGCAGCTATCTCTCATAAA
GGGTCCTGCTACCACCCTGAAGAGTCAAGTTTCCCCTTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTTT
TTNTCNNNCAATTTCTATTATTTTTTTTCTTCTCCACTTACATATTTTTT
CTCCAATACCACTTTTAATTAATATCACTATTTCCCCAATAATTTTTAAC
CTTT

Query= MSMg01no501_k05.g1 MSMg01no501_k05.g1 CHROMAT_FILE:
MSMg01no501_k05.g1 PHD_FILE: MSMg01no501_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:30 2005
         (566 letters)



>mm_chr1_19017411_19018374
          Length = 964

 Score =  754 bits (390), Expect = 0.0
 Identities = 415/424 (97%), Gaps = 2/424 (0%)
 Strand = Plus / Minus

                                                                       
Query: 77  tatacatgtggaagtcagaagtttacactgaatgacatcctcaacttcctgacacttgag 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tatacatgtggaagtcagaagtttacactgaatgacatcctcaacttcctgacacttgag 905

                                                                       
Query: 137 cttttgggatagggccctttgctgaactttgactcagctgtactgactggccagcagctt 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cttttgggatagggccctttgctgaactttgactcagctgtactgactggccagcagctt 845

                                                                       
Query: 197 ggaggggtcctcctggctctgccttcccagtgctgaatttcaggagtatatgttattttt 256
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 844 ggaggggtcctcctggctctgccttcccagtgctgaatttcaggagtatatgttatgtct 785

                                                                       
Query: 257 aggttttgaggtcagctctggggattcgactcaggtccagatcttgtatggcaagtactt 316
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 784 aggttttgaggtcagctctggggattcgactcaggtcctcatcttgtatggcaagtactt 725

                                                                       
Query: 317 taaccaccaagccatctctcaagccctaggaacatttttaaaagccatctcatttattgt 376
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||
Sbjct: 724 taaccaccaagccatctctcaagccctaggaacattttaaaaagccatctcatttgctgt 665

                                                                       
Query: 377 ctagggtgctccacttctcaagttcatttgttgaaaacatattactgaaattaagtctta 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ctagggtgctccacttctcaagttcatttgttgaaaacatattactgaaattaagtctta 605

                                                                       
Query: 437 ttcataaatctcttttttttttgcagctatctctcataaagggtcctgctaccaccctga 496
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttcataaatctc--ttttttttgcagctatctctcataaagggtcctgctaccaccctga 547

               
Query: 497 agag 500
           ||||
Sbjct: 546 agag 543


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 159
Number of extensions: 64
Number of successful extensions: 64
Number of sequences better than 10.0: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 964
Length adjustment: 10
Effective length of query: 556
Effective length of database: 954
Effective search space:   530424
Effective search space used:   530424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)