GCGGCCGCTATACGACTCACTNATCGNAACCATCCGCGGAATTCAAAAGG
ATACTAAGCTGAAGTGCCCAAGTGAGGATGCCTCAGTCTCACTTGTGAGA
GAGAATAAAGCAATCAAAAGTGGGGAGGAGTGAGGGACATGGGAGGGAAA
GTGGACAGGGTGGGGAGGGGAAAATGTTTTTTNNTTTNTTTTTTTTATTT
TTTTTTTTTTTTTTNTTTAGNNNTTTTTTTTTTTTTTTTTTTTTTGGGGT
GTGTTTGTGTGGTGGGTGTGTTTTTTTTTTTTTTTTGTGGACATAGGTAG
TTTTTAGATAATTTTGAGGGAACCAGAGANGAGTATATCCATATTTTTTT
TCCCCCCCCCCCCCTCTCCTCTTCCACCTTCCTCTTATTCCCCTCCCTTC
CTTTTTTTCTCCCCCCCTCTTTTTTCTTTCCCTCCCCCCCTCCCTCTCCC
CCCCTTCTTTCTCTCATTACCCTCTTTTCCTCTCTCTTTCTCCCCCTTCT
CCCCTCCCCCTTCCCCATCTTCTCCCTTTTTTTCCCCTCCCTTCCCCCCT
TTCCCCTTTCCTTTCTCCCTTTTCTCCTCCCTCTTCTCTTCTTCTCCCTT
CCCTCTTTCCCCTCCCCCCCCCTTCCTCCCTCCTTTCCCTCCTCCCCCCC
CTCCCACCCCCCCCCCTCTTTTTTTTCTTCCTTCTTCCTCCTCCTTCCTC
TTTTCTCCCCTTCCTCCCCTCCTCTTCCCTCTTTCCCTTTCTTCCCCCCC
TCTTTTCCCC

CGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTTCTACAAAATTCCAGAATTACAGTCTTAATTAAATACC
TATCTTGATAAAGTGGCAAATGCTAATAAATAAACTAATGGTGACAGATG
AAACTGCTATATTGGATATGGAACATTTAAAAATGAGAAACAAAACAATA
GGCTAGTGTGATGTTTTCCTTTTCCAGCAGAAGATGTCTGGCTATTCTGT
CTATAAAAACATGAAGTTACTTAGGAACTAAATTAAAAATTCTTGCACCT
CATCTTCTCTCAGAGCCTTTTTTACAAACTTTTATTTTTTTCAAAATACT
TATAAGTTTCTAATCTTTATCTGATATAAAATTATAATTCCTGGCAGTAA
ATAATTTATCTATAAGAAGAATTACACAACATTGTCACCTTTGATCAACA
CAAACCTGATAATCGTAAATGAAGTAGAATTCTAAAGATGTGTGGAAAAG
CTTATAGGTCATAATGATAAGACTAAAGATGTTCTTATTCAGAGTTCTAC
ATTTCAGGTGTTAAGCCCAGGTCAAACATACTTAGATTCTGTGAAAATAT
TAATTGCTTGGCATAATGTCAGTGAAGTTCAAATATCAACCCTATTTTGG
CACACTCTAGAGTAAGGTTGTGTATAAGGCATGGATCTATTACGTGAAAA
TTAAGATGGATTAAGTCATAACCAAAGGATGGACAGTAAGATAT

Query= MSMg01no502_g07.g1 MSMg01no502_g07.g1 CHROMAT_FILE:
MSMg01no502_g07.g1 PHD_FILE: MSMg01no502_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:25 2005
         (588 letters)



>mm_chr1_111479696_111480684
          Length = 989

 Score = 1038 bits (537), Expect = 0.0
 Identities = 576/589 (97%), Gaps = 1/589 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attccagaattacagtcttaattaaatacctatcttgataaagtggcaaatgctaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 attccagaattacagtcttaattaaatacctatcttgataaagtggcaaatgctaataaa 730

                                                                       
Query: 61  taaactaatggtgacagatgaaactgctatattggatatggaacatttaaaaatgagaaa 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 729 taaactaatggtgacagatgaaacttctatattggatatggaacatttaaaaatgagaaa 670

                                                                       
Query: 121 caaaacaataggctagtgtgatgttttccttttccagcagaagatgtctggctattctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 caaaacaataggctagtgtgatgttttccttttccagcagaagatgtctggctattctgt 610

                                                                       
Query: 181 ctataaaaacatgaagttacttaggaactaaattaaaaattcttgcacctcatcttctct 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 609 ctataaaaacatgaagttacttaggaactaaattaaaaattcttgcgcctcatcttctct 550

                                                                       
Query: 241 cagag-ccttttttacaaacttttatttttttcaaaatacttataagtttctaatcttta 299
           ||||| ||   || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cagagtccaaattgacaaacttttatttttttcaaaatacttataagtttctaatcttta 490

                                                                       
Query: 300 tctgatataaaattataattcctggcagtaaataatttatctataagaagaattacacaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tctgatataaaattataattcctggcagtaaataatttatctataagaagaattacacaa 430

                                                                       
Query: 360 cattgtcacctttgatcaacacaaacctgataatcgtaaatgaagtagaattctaaagat 419
           || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 429 cagtgtcacctttgatcaacacaaacctgataatcgtaaatgaagtagaatcctaaagat 370

                                                                       
Query: 420 gtgtggaaaagcttataggtcataatgataagactaaagatgttcttattcagagttcta 479
           |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 369 gtgtggaaaagcctataggtcataatgataagactaaagatgtccttattcagaggtcta 310

                                                                       
Query: 480 catttcaggtgttaagcccaggtcaaacatacttagattctgtgaaaatattaattgctt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 catttcaggtgttaagcccaggtcaaacatacttagattctgtgaaaatattaattgctt 250

                                                            
Query: 540 ggcataatgtcagtgaagttcaaatatcaaccctattttggcacactct 588
           |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 249 ggcataatgtcagtgaagttcaaatatcaaccctattttggcgcactct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 989
Length adjustment: 10
Effective length of query: 578
Effective length of database: 979
Effective search space:   565862
Effective search space used:   565862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)