GACTCACTTTCGAAAGAGGATCCGCGGAATTCTGCATTACACAATCTGGT
CCTGGGCGTTTTTTGCTTGGGAGAATTTTAAGGACTGTTTCTATTTCTTT
AGGAATTATGAGACTATTTAGATGGTATATTTGATCCTGACTTAACTTTG
GTATTAGGTATCTGTCTAGAAAATTTTCCATTTCATCCAAATTTTCCAGT
TTTGTTGAATTTAGGCTTTTGTAGTAGGATCTGATGACTTTTTGGATTTC
CTCAGTTTCTGTTGACATGTATCCCTTTTCATTTCTAATTTTATTAATTT
GGATATTGTCTCTGTGCTCTCTGGCTAGTCTCACTAAGGGTTTCTCTATC
TTGTTAATTTTCCCAAAGAACCAGCTCCAGTTTTGTTGATTCTTTGTATA
GTTCTTTTTGTTTCTACTTCGTTGATTTCAGCCCTGAGTTTGAATATTTT
CTGCCTTCTACTCCCCTTTGGCATACTTATCTCTTTTGCTTTAGAGCTTC
CAGGTATGCTGTCAAGCTGCTAGTGTAAGCTCTCTCCAGTTTCTTTTTAG
AGGCACTTAGACCTATGAGTTTTCCTCATAGCACTGCTTTTATTGTGTAC
AATTAGTTTTGGTATGATGTGTCTTCATCTTTGTTAAATTCTAAAAAGNC
TTTAATTTCTTTCTTTATTTCTTCCTTGAATAAGTGATCATTGAGTAGAG
CTTTGTTCAGCTTACAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAACCTGTGTTCTGAGTATTAATC
TTCATGGACATACTCTGTATATTCCCTCATAGTGTCATTATAATATCTCC
ACTCTTACCAGGATGGCCTCCATGTGTTTTGTCATTAACATGCATACTTA
TTGATCGCTATGGGAAAGGATAAGTCTTTAGAGACATTAGCAGCCAAATC
CTTGCAAAATTTTTTAGGGGCACAGAGGTATAAACTCAGTGGTAGAGTGA
TAGAAATGGGGGAACAATGTAGTCATGGTCATTCGTGGCTAACAGAAAGT
TGGAGATAAGCCTGGGATACATGTGACTTATTTTCCATAACCAAAGTAGG
AACAACTTATGGGCATTACAGAAATAGCAACCTAGGAATATCACCCTGAT
GGACACCTCACCCTTTTAAGAGGAAAGACTCATAGCTTGGCATGCTGTTA
TATTTTCCCAATAAGATTTTGAGGAATTGGTCTGGAATATGGTCAGAGGA
AATATGGCATACTCTAGGAAAGCCCAAACTGTCAGAAGGCATGTTGCTCT
GAGGTTATCTAAAATCAAACCAAAATGGTTTAAGGAGAAGGTGTAGAAAC
CTATTGTTACAGGCCCCAGAGTAGTAAGGGTGGGCAATAGTAAACTCAGA
GTCACTAAAACACCCATCAAGGGTAGAACCTCTTGCCAGTGTGTTTA

Query= MSMg01no502_k10.g1 MSMg01no502_k10.g1 CHROMAT_FILE:
MSMg01no502_k10.g1 PHD_FILE: MSMg01no502_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:45 2005
         (626 letters)



>mm_chr1_124993001_124994025
          Length = 1025

 Score = 1102 bits (570), Expect = 0.0
 Identities = 609/622 (97%), Gaps = 1/622 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taacctgtgttctgagtattaatcttcatggacatactctgtatattccctcatagtgtc 60
           ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 821 taacctgagttatgagtattaatctccatggacatactctgtatattccctcacagtgtc 762

                                                                       
Query: 61  attataatatctccactcttaccaggatggcctccatgtgttttgtcattaacatgcata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 attataatatctccactcttaccaggatggcctccatgtgttttgtcattaacatgcata 702

                                                                       
Query: 121 cttattgatcgctatgggaaaggataagtctttagagacattagcagccaaatccttgca 180
           | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 701 catattgatcgctatgggagaggataagtctttagagacattagcagtcaaatccttgc- 643

                                                                       
Query: 181 aaattttttaggggcacagaggtataaactcagtggtagagtgatagaaatgggggaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaattttttaggggcacagaggtataaactcagtggtagagtgatagaaatgggggaaca 583

                                                                       
Query: 241 atgtagtcatggtcattcgtggctaacagaaagttggagataagcctgggatacatgtga 300
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggtagtcatggtcattcgtggctaacagaaagttggagataagcctgggatacatgtga 523

                                                                       
Query: 301 cttattttccataaccaaagtaggaacaacttatgggcattacagaaatagcaacctagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cttattttccataaccaaagtaggaacaacttatgggcattacagaaatagcaacctagg 463

                                                                       
Query: 361 aatatcaccctgatggacacctcacccttttaagaggaaagactcatagcttggcatgct 420
           ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 462 aatatcaccatgatggacacctcacccttttaagaggaaagacccatagcttggcatgct 403

                                                                       
Query: 421 gttatattttcccaataagattttgaggaattggtctggaatatggtcagaggaaatatg 480
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gttatattttcctaataagattttgaggaattggtctggaatatggtcagaggaaatatg 343

                                                                       
Query: 481 gcatactctaggaaagcccaaactgtcagaaggcatgttgctctgaggttatctaaaatc 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcatactctaggaaagccctaactgtcagaaggcatgttgctctgaggttatctaaaatc 283

                                                                       
Query: 541 aaaccaaaatggtttaaggagaaggtgtagaaacctattgttacaggccccagagtagta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaaccaaaatggtttaaggagaaggtgtagaaacctattgttacaggccccagagtagta 223

                                 
Query: 601 agggtgggcaatagtaaactca 622
           ||||||||||||||||||||||
Sbjct: 222 agggtgggcaatagtaaactca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space:   625240
Effective search space used:   625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)