Query= MSMg01no502_n08.b1 MSMg01no502_n08.b1 CHROMAT_FILE:
MSMg01no502_n08.b1 PHD_FILE: MSMg01no502_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:58 2005
(579 letters)
>mm_chr1_172868837_172869815
Length = 979
Score = 1067 bits (552), Expect = 0.0
Identities = 572/580 (98%), Gaps = 4/580 (0%)
Strand = Plus / Minus
Query: 2 agaacgaaccacacggtttcacttctgtaaacaaggctccttgcccccgctgcccaggat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 agaacgaaccacacggtttcacttctgtaaacaaggctccttgcccccgctgcccaggat 720
Query: 62 gtgcatgatcgcacataggcaggagatacataggcacgaaacacgtcatgatgcgtgctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gtgcatgatcgcacataggcaggagatacataggcacgaaacacgtcatgatgcgtgctt 660
Query: 122 accgccattaggtaaagatgggacgtacttgaccccgagggttttgcctttatatttaac 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 659 accgccattaggtaaagatgggacgtacttgaccccgagggttttgcctttataagcaac 600
Query: 182 aaactaacaaaattcgagaccttctctggtgatccctggtatggatctggccggtgtctg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aaactaacaaaattcgagaccttctctggtgatccctggtatggatctggccggtgtctg 540
Query: 242 ttgttcntt--tttgcttcaattttggctcaaaaactgtggtagtgggattattcctgct 299
|||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttgtcc--tagtttgcttcaattttggctcaaaaactgtggtagtgggattattcctgct 482
Query: 300 tagtgggattaacataacacacccaaatagcctatcctctcttaaatgccttcattcttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagtgggattaacataacacacccaaatagcctatcctctcttaaatgccttcattcttt 422
Query: 360 catttactgccagcagccaggtttaaggacttcatgacaaatgtctgccaggaagatttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catttactgccagcagccaggtttaaggacttcatgacaaatgtctgccaggaagatttg 362
Query: 420 cgtgtattttttatatatacaaatgatgcccagctagcagcactatgagattccacactt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtgtattttttatatatacaaatgatgcccagctagcagcactatgagattccacactt 302
Query: 480 tgggtaattagaggctaaaggcttggctaccattaggaactgggaacaactccccagacg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggtaattagaggctaaaggcttggctaccattaggaactgggaacaactccccagacg 242
Query: 540 ataagaagtagttgagaagtctggttgagctctggagcat 579
||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataagaagtagttgagaagtctggttgagctctggagcat 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_n08.g1 MSMg01no502_n08.g1 CHROMAT_FILE:
MSMg01no502_n08.g1 PHD_FILE: MSMg01no502_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:58 2005
(400 letters)
>mm_chr1_172682378_172683177
Length = 800
Score = 774 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Plus
Query: 1 cttaaatccacaacatttgcaactaatactgttttcctgtagttacataaactgttgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaatccacaacatttgcaactaatactgttttcctgtagttacataaactgttgatt 260
Query: 61 agaaacccgaagtgtctactcactgaagaaataattaggaaatttgaattcatcaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaacccgaagtgtctactcactgaagaaataattaggaaatttgaattcatcaaaata 320
Query: 121 tataaacacacataataaaataccatgaaaacaaaaattgcaagaaaaaaattagaggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaacacacataataaaataccatgaaaacaaaaattgcaagaaaaaaattagaggta 380
Query: 181 gtaaaattaagtggaatgtcgtcatgcaaagcctattaaataacgtagagctgctcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaattaagtggaatgtcgtcatgcaaagcctattaaataacgtagagctgctcacca 440
Query: 241 taataaaaacataagcaaatacattcattactcatcccccaaatagacacagtcagtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taataaaaacataagcaaatacattcattactcatcccccaaatagacacagtcagtaga 500
Query: 301 aatagctaaaatgaatgtggtatttgtgccactaatgtatgcaataaaactacagaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatagctaaaatgaatgtggtatttgtgccactaatgtatgcaataaaactacagaccaa 560
Query: 361 acaacaggaaaaattaaaaaaataaatctgcaccactaat 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaacaggaaaaattaaaaaaataaatctgcaccactaat 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
