Query= MSMg01no503_p11.b1 MSMg01no503_p11.b1 CHROMAT_FILE:
MSMg01no503_p11.b1 PHD_FILE: MSMg01no503_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:24 2005
(450 letters)
>mm_chr1_162499052_162499901
Length = 850
Score = 775 bits (401), Expect = 0.0
Identities = 439/455 (96%), Gaps = 6/455 (1%)
Strand = Plus / Plus
Query: 1 atcttcttcaccaatagggtgtatttattttctgatttacaacccaccaagaaccttcta 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttcttcaccaatagggtgaatttattttctgatttacaacccaccaagaaccttcta 260
Query: 61 atgttatccatctgtgcagaattttaagtcgtaagccatccagcctctggctcatagatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 atgttatccatctgtgcagaattttaagtcgtaagccatccagcctctggctcagagatc 320
Query: 121 tagagtagaaccaaagacaaccaattaacacacacacacacaca------gagagagaga 174
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tagagtagaaccaaagacaaccaattaacacacacacacacacacacacagagagagaga 380
Query: 175 gagagagagagagagagagagagagagagagagagagagagagagagaatgaaataattc 234
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gagagagagagagagagagagagagagagagagagagagagagagaaaatgaaataattc 440
Query: 235 ttatttttaacctgttctgctcagagataagtactagcccatttgtcatctgagaggctt 294
|| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ctaatgataacctgttctgctcagagataagtactagcccatttgtcatcagagaggctt 500
Query: 295 ctcaggcagctgaaggtatcaaaggcagaaacccacagcctagcatgggcagagcttgga 354
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ctcaggcagctgaaggtagcaaaggcagaaacccacagccaagcatgggcagagcttgga 560
Query: 355 gaaccttgagaagaggggaagcaaggattgtaggagccagagggctggggataccaggag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaccttgagaagaggggaagcaaggattgtaggagccagagggctggggataccaggag 620
Query: 415 aacatggctcacaaaatcaactaagcagagactaa 449
|||||||||||||||||||||||||||||||||||
Sbjct: 621 aacatggctcacaaaatcaactaagcagagactaa 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_p11.g1 MSMg01no503_p11.g1 CHROMAT_FILE:
MSMg01no503_p11.g1 PHD_FILE: MSMg01no503_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:24 2005
(104 letters)
>mm_chr1_162660069_162660572
Length = 504
Score = 182 bits (94), Expect = 6e-51
Identities = 100/102 (98%)
Strand = Plus / Minus
Query: 1 gactctcttggacaccgggataactggatacatttggctttttgaccttgcaaacttctg 60
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gactctcttggacactgtgataactggatacatttggctttttgaccttgcaaacttctg 243
Query: 61 taaccctattggactggatctttgtaatacattgcaaaatag 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taaccctattggactggatctttgtaatacattgcaaaatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
