Query= MSMg01no504_c10.b1 MSMg01no504_c10.b1 CHROMAT_FILE:
MSMg01no504_c10.b1 PHD_FILE: MSMg01no504_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:40 2005
(646 letters)
>mm_chr1_11189388_11190433
Length = 1046
Score = 1180 bits (610), Expect = 0.0
Identities = 634/642 (98%)
Strand = Plus / Plus
Query: 5 gaattcactagctctaagttgttggctcactttctagtaacatcatggtttctttcatgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactagctctaagttgttggctcactttctagtaacatcatggtttctttcatgt 264
Query: 65 tgaatgagttttaagtgttaccagggagctgttggttagtgctagggtgtgtgtgccact 124
|||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 265 tgaatgagttttaagtgtaaccagggagctgttggttaatgctggggtgtgtgtgccact 324
Query: 125 cctgctccatgtgggtggtggtctctccaacattttttgttttgaattcctttttgagac 184
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 325 cctgctccatgtgggtggtggtctctccaacagtttttgttttgaatttctttttgagac 384
Query: 185 agggtctcactacatgtccctggcattctaggaactcactatatagaccaggttgctcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agggtctcactacatgtccctggcattctaggaactcactatatagaccaggttgctcat 444
Query: 245 gaactcacagaaattgtactgggattaaaagcaccatacctggctactacaataaagctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaactcacagaaattgtactgggattaaaagcaccatacctggctactacaataaagctg 504
Query: 305 cctttgtgttcttttccatcacagatagtgaaacccaactccggagagacatggttttct 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 cctttgtgttcttttccatcacagacagtgaaacccaactccggagagacatggttttct 564
Query: 365 gtcaaagtcttgtggccactgtctgtgccttctctgagcagctcatggctgccttaaacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcaaagtcttgtggccactgtctgtgccttctctgagcagctcatggctgccttaaacc 624
Query: 425 agatgtttgacaacagcaaggaaaatgaaatggagacttgtgaagccagcaggaggtggc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agatgtttgacaacagcaaggaaaatgaaatggagacttgtgaagccagcaggaggtggc 684
Query: 485 tggatcagattgcaaatgctggtgtgctttttcacttccagtcacttctgtcaccaaatt 544
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaccagattgcaaatgctggtgtgctttttcacttccagtcacttctgtcaccaaatt 744
Query: 545 tggtaagtgaccttatgactgccattgcctgcatctgcctgcacagtcacgttgttacca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tggtaagtgaccttatgactgccattgcctgcatctgcctgcacagtcacgttgttacca 804
Query: 605 aatatgaagcagttggtcattttagagactttaaagggaaaa 646
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 805 aatatgaaggagttggtcattttagagactttaaagggaaaa 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_c10.g1 MSMg01no504_c10.g1 CHROMAT_FILE:
MSMg01no504_c10.g1 PHD_FILE: MSMg01no504_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:40 2005
(526 letters)
>mm_chr1_11340223_11341148
Length = 926
Score = 540 bits (279), Expect = e-157
Identities = 315/327 (96%), Gaps = 2/327 (0%)
Strand = Plus / Minus
Query: 201 tttttgtatacattcctctgttttatgtaaaagtcacttattattctgctcactttgtga 260
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 926 tttttgtatacattcctctgttttatgtaaaagtcacttataagtctgctcactttgtga 867
Query: 261 caaattacattcaggtacaacactacattgtgtccatgtctgtttgtcacccttttcgct 320
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 866 caaattacattcaggtacaacactccattgtgtccatgtctgtttgtcacccttttcgct 807
Query: 321 gactccctgcccaactgtaccaggaccctgatttctcccgagaattgaggagggccaact 380
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gactccctgcccacctgtaccaggaccctgatttctcccgagaattgaggagggccaact 747
Query: 381 gaggccagtccgtggc-aagagtacatcgaccaagttaggttctatagctatgttctgcc 439
|||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 746 gaggccagtctgtggcaaag-gtacatggaccaagttaggttctatagctatgttctgcc 688
Query: 440 ttccaacaaaaataaacatgtcatataaattgaatgtaaatgtttgtcacaaaatcacat 499
||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 687 ttccaacgagaataaacatgtcgtataatttgaatgtaaatgtttgtcacaaaatcacat 628
Query: 500 tgaaaagcaatcaggaaagaaaatgca 526
|||||||||||||||||||||||||||
Sbjct: 627 tgaaaagcaatcaggaaagaaaatgca 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
