Query= MSMg01no504_i03.b1 MSMg01no504_i03.b1 CHROMAT_FILE:
MSMg01no504_i03.b1 PHD_FILE: MSMg01no504_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:08 2005
(454 letters)
>mm_chr1_166726490_166727342
Length = 853
Score = 832 bits (430), Expect = 0.0
Identities = 448/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Plus
Query: 1 agctggacgcaagcaaggccaatttctcagcgtggaaaagcttttgcttgagcaatgaca 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctggacgcaagcaaggccagtttctcagcgtggaaaagcttttgcttgagcaatgaca 260
Query: 61 cactgcagttggatccagttcacccacatctgggaaccacatgtcagcggcagctgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactgcagttggatccagttcacccacatctgggaaccacatgtcagcggcagctgtata 320
Query: 121 aagtcagcccagcaaactgagggtgacatttttttttgccagaagccaggcagtatggac 180
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 321 aagtcagcccagcaaactgagggtgaca-ttttttttgccagaagccgggcagtatggac 379
Query: 181 ctcgctcttctgtgggttcttctgccactggtgaccacagcctggggccagtatggtggc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcactcttctgtgggttcttctgccactggtgaccacagcctggggccagtatggtggc 439
Query: 241 tacgggtacttataccagcagtaccaggactacggtgatgatggatgggtgaatcttaac 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tacgggtacccataccagcagtaccaggactacggtgatgatggatgggtgaatcttaac 499
Query: 301 cgccaaggcttcagctaccagtgtccccacgggcaagtggtggtagctgtgaggagcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgccaaggcttcagctaccagtgtccccacgggcaagtggtggtagctgtgaggagcatc 559
Query: 361 tttagcaagaaggaaggctctgacagacaatggaactatgcctgcatgcctacaccccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttagcaagaaggaaggctctgacagacaatggaactatgcctgcatgcctacaccccaa 619
Query: 421 agcctgggggagcccactgagtgctggtgggagg 454
||||||||||||||||||||||||||||||||||
Sbjct: 620 agcctgggggagcccactgagtgctggtgggagg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 853
Length adjustment: 10
Effective length of query: 444
Effective length of database: 843
Effective search space: 374292
Effective search space used: 374292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_i03.g1 MSMg01no504_i03.g1 CHROMAT_FILE:
MSMg01no504_i03.g1 PHD_FILE: MSMg01no504_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:08 2005
(614 letters)
>mm_chr1_166883569_166884582
Length = 1014
Score = 959 bits (496), Expect = 0.0
Identities = 514/520 (98%)
Strand = Plus / Minus
Query: 95 taagattatacagcccaagcaattatctctatatatttatgaatacatttaggatattta 154
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 taagattatacagaccaagcaattatctctatatatttatgaatacatttaggatattta 955
Query: 155 ggagtatatataagtaaaataagaggccatagatttgggggggagagaaaaaagtgttat 214
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 954 ggagtatatataagtaaaataagaggctatagatttgggggggagagaacaaagtgttat 895
Query: 215 gtggttggaaagagaaaagggttggagagagaaaaggaaaaggagaaatgatataactac 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gtggttggaaagagaaaagggttggagagagaaaaggaaaaggagaaatgatataactac 835
Query: 275 attaatttcaaaaataaaaaataatattttaaaaaagtagctattaggaagtcatataag 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 834 attaatttcaaaaataaaaaataatattttaaaaaagtagctattaggaagtcatgtaag 775
Query: 335 tatcagagaaaagagtttctttttgctatgcactctccagagactacattacctagaaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tatcagagaaaagagtttctttttgctatgcactctccagagactacattacctagaaga 715
Query: 395 caaattgaatcagaatactgtagcccaccaccgtataatgaagcttcagggagattcata 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caaattgaatcagaatactgtagcccaccaccgtataatgaagcttcagggagattcata 655
Query: 455 atgtgatccttgtgtggaagagtatgaaataaagatcaacttttccacttggacccctgg 514
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atgtgacccttgtgtggaagagtatgaaataaagatcaacttttccacttggacccctgg 595
Query: 515 tttatcttgaatagaacctcccatgtaggtgtcccatccccagtccttgaattaagtgac 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tttatcttgaatagaacctcccatgtaggtgtcccatccccagtccttgaattaagtgac 535
Query: 575 tgtgctggtggtcccacacccaggggaaacatctcgttcc 614
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 534 tgtgctggtggtcccacacccaggggaaacatctcattcc 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
