AGGAGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTCTTTTCATCTCTGTGGTAAGAGGTTCTTTGGTTGAGT
GAGGTCCTTATGTTCACTCCACCCCATATTCTGTAAAATAATGATTTTCT
TTTAAATAGACAGTATCTTGTCTTGAGTGTGTTCACTTTACAAGCAGCAT
TGGATTCTGTTTGGAGAATGGTGGATCACTCTGCACATGTGAATGTCATC
ATCTGTCTTTCACTATCCATACAAGACAGACTGATAATTGACTCATTCCC
AAGGCAGGATTCTATAAATTGATTTAGATGAATTGAGAATCTAGAGATAC
ATAGATGAGGGTGATATCATCATTTCAAAAAATTCCCAAGAATGTTTTGG
ACTTATTGGAATAAAAAAGATGTTGTGCACTCATGTAGGTACCATAAAGA
CGTAGAAAACTGGCATTGTGGTGATGCTTCTTATCAACCTGTTATCTGGA
CTACCATGTGCACGTCAAAGAATCCTAATTGTCACAAGGGCTTCAGCTCA
GTTCCCAATTATTGATGTTACATATCTGCTGTCATCCTGGCTCCCCATTT
GTGTCCATCTAAACCTGCTGCCCATGTTTCTACATGCCTATTTGGACCAG
GTCATCTTGACCAGATGTGAAGTGACTGCAGAGCTCATATTGGCAATTTA
GATTCAAGTAAAAGAATGAGTATTCTCTTCAGTCAAGATGACCAAAGA

NGGGGACGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTTCCCCAAGAATTCCTAAAATTAGATCAGTCA
TTATTAAGCTCTTTTATAGTGGTACAGCTGTTAGGTCCTTTCCTTATAGT
CAAAACTGCAATAACAACTGTGCCAGTCTCCCAAGTGTCACCAGTTAATA
GCTCTTAGATAGTAACCAGACTTTCTACTACTCAGAGCACATTCCAATAG
GTTGTAAAACAATTAACTAAAGGTCATGGAAAGGGAACTAATGATTTAAA
ATAGGTGCTAGAATAGAAGACAAAATTTTTAATAGGTTTATCTATAAAAA
ACTTCACTAATAACTTAGTTATGCTTCCCAACTTATTATAAACCTGTGGA
GCTGTGACATGTGATGGATGTTTAGTCAGATAATTAATCCTAATGGATAT
GCATACAAACACTCTCTGTTGTAAACTACTATTTCAATTTATGATTTGAT
TGTGTGTATGAAGTTTTGATGAACTTTTCAACATGTGATCATATATTCTA
AAAGTAGTTTAAGTGCTGAGGACAAAGAACTAAGAAGAACTGAGTTCAGA
GAGGAACTGAGATGAGGAGAAGTTTTTAGACAGAACACTTTTTAGACAGA
AATGAACACAAGAAGAACTTAGAAGTATAGACAAAACTGGGAGAAAAGGC
ATCGAGCATTATTGCATTATTGTGACATCAGAGAAGGAGAAGAGAGCAAG
CTTATAAG

Query= MSMg01no505_c08.b1 MSMg01no505_c08.b1 CHROMAT_FILE:
MSMg01no505_c08.b1 PHD_FILE: MSMg01no505_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:59 2005
         (669 letters)



>mm_chr1_150939725_150940791
          Length = 1067

 Score = 1232 bits (637), Expect = 0.0
 Identities = 661/669 (98%), Gaps = 2/669 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggtaagaggttctttggttgagtgaggtccttatgttcactccaccccatattctgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tggtaagaggttctttggttgagtgaggtccttatgttcactccaccccatattctgtaa 808

                                                                       
Query: 61  aataatgattttcttttaaatagacagtatcttgtcttgagtgtgttcactttacaagca 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aataatgatttt-ttttaaatagacagtatcttgtcttgagtgtgttcactttacaagca 749

                                                                       
Query: 121 gcattggattctgtttggagaatggtggatcactctgcacatgtgaatgtcatcatctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gcattggattctgtttggagaatggtggatcactctgcacatgtgaatgtcatcatctgt 689

                                                                       
Query: 181 ctttcactatccatacaagacagactgataattgactcattcccaaggcaggattctata 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 688 ctttcactatccatacaagacagactgataattgacttattcccaaggcaggattctata 629

                                                                       
Query: 241 aattgatttagatgaattgagaatctagagatacatagatgagggtgatatcatcatttc 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aattgattgagatgaattgagaatctagagatacatagatgagggtgatatcatcatttc 569

                                                                       
Query: 301 aaaaaattcccaagaatgttttggacttattggaataaaaaagatgttgtgcactcatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaaaaattcccaagaatgttttggacttattggaataaaaaagatgttgtgcactcatgt 509

                                                                       
Query: 361 aggtaccataaagacgtagaaaactggcattgtggtgatgcttcttatcaacctgttatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aggtaccataaagacgtagaaaactggcattgtggtgatgcttcttatcaacctgttatc 449

                                                                       
Query: 421 tggactaccatgtgcacgtcaaagaatcctaattgtcacaagggcttcagctcagttccc 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tggacta-catgtgcacgtcaaagaatcctaattgtcacaagggcttcagctcagttccc 390

                                                                       
Query: 481 aattattgatgttacatatctgctgtcatcctggctccccatttgtgtccatctaaacct 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 389 aattattgatgttacatatctgctgtcatcctggctccccatttgtgtccatataaacct 330

                                                                       
Query: 541 gctgcccatgtttctacatgcctatttggaccaggtcatcttgaccagatgtgaagtgac 600
           ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 gcttcccatgtttctacatgcctatttggaccaggttatcttgaccagatgtgaagtgac 270

                                                                       
Query: 601 tgcagagctcatattggcaatttagattcaagtaaaagaatgagtattctcttcagtcaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgcagagctcatattggcaatttagattcaagtaaaagaatgagtattctcttcagtcaa 210

                    
Query: 661 gatgaccaa 669
           || ||||||
Sbjct: 209 gacgaccaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1067
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1057
Effective search space:   696563
Effective search space used:   696563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)