NNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTTCGCTCTGTACTCCCATTTTTAATAGGGTTATTTG
GTTTTCTGGGGTCCAACTTCTTGAGTTCTTTATATACATTGGATATTAGT
CCCCTATCAGATTTAAGATTGGTGAAGATCTTCTTTCGATCTGTTGGTTG
CCATTTTGTCTTATTGAAAGTGTCCTTTGCCTTACAGAAGCTTTACAATT
TTATGAGGTCCCATTTGTCAATTCTTGATCTTTCAGCACAAGCCATTGCT
GTTCTGTTCAGGAATTTTTCTCCTGTGCCCATATCTTCGAGGCTCTTCCC
CACTTTCTTCATTTATAGGTTTCAGCGTCTCTGGTTTTATATGGAGTTCC
TTGATCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATCAAT
TCACGTTCTTCTACATGCTAATCGTCAGTTGAGCCAGCACCATTTGTTGA
GAACGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCTAAGATC
AAGTGACCACAGATGTGTGGGTTCATTTTTGGGACTTGGATTCTATTCCA
TTGATCTACCTGTCACTGTACCCGTACCATGTAGTTTTTATTACATTACT
CTGTAGTACAGCTTGAGGTCAGGGATGGTGATTCCCCCAGAGGTTCTTTT
ATTGTTGAGAATAGTTCTTGCTATCCTAGGTTTTTTGTTATTCCAGAT

NNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACCGGAGGGCAGAACCAAGAACA
TACAGAATGAAGCATGGGGCAAGCTGAAACAACCACAGAACACTTGACAC
CCAAGGAAGTTTGTCCAGCCACAATTTCAGCTTACATTGCACAGAGGACA
TTTTACCTTCCATTTTGATCCCTACTTGAATATAACTGCAAGTAATTATT
ATCCCACACCTGTCCCATCAATGTACATCTGGAGCAGATAGCATGCGTAT
TTAGTTCCATAGATAGAGAATTATTGTGGGTAGGCGCCTTTAATGCTTGG
TTTGAGTTGAAGCATTTAGACTTCGTGATAGGGTAAAGGCATCAGAATAG
CCAGTAGAAAAAGTTTTTCAGATTTTGAATTCCAATTCTGGCCTAGAAAG
AGGAAATAGGGTGTTCTGTCTTGATGACAGGCAACTCTCAGCCACAAATG
GCAAAATTTAAACGTATTTGAAATTCTAATCACAGAAGATTGATCACTGA
ATCACATAAAGCTAAAAAGACTGAAGGGAGAAAAGACCAACCATCGAACA
AAAAAGTGGGTAAAATACACGAAAAAATAATTTAAAAAAAAACAACCAAG
ACTGTTAACAAATGACATTTAAACATATGAGTAAATTCACAATCTCACTA
ACAATGAAAGAAAAAGTAAATGAAACTATCATTTTTTTATGTGTTACTTG
GTG

Query= MSMg01no505_d15.g1 MSMg01no505_d15.g1 CHROMAT_FILE:
MSMg01no505_d15.g1 PHD_FILE: MSMg01no505_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:05 2005
         (668 letters)



>mm_chr1_77772082_77773149
          Length = 1068

 Score = 1075 bits (556), Expect = 0.0
 Identities = 643/678 (94%), Gaps = 14/678 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   accggagggcagaaccaagaacatacagaatgaagcatgggg--------caagctgaaa 52
           ||||||||||||||||||||||||||||||||||||||||||        ||||||||||
Sbjct: 956 accggagggcagaaccaagaacatacagaatgaagcatggggcagatggtcaagctgaaa 897

                                                                       
Query: 53  caaccacagaacacttgacacccaaggaagtttgtccagccacaatttcagcttacattg 112
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 896 caaccacagaacacttgacatccaaggaagtttgtccagccacaatttcagcttacattg 837

                                                                       
Query: 113 cacagaggacattttaccttccattttgatccctacttgaatataactgcaagtaattat 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 cacagaggacattttaccttccattttgatccctacttgaatataactgcaagtaattat 777

                                                                       
Query: 173 tatcccacacctgtcccatcaatgtacatctggagcagatagcatgcgtatttagttcca 232
           ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 776 tatcccacatctgtcccatcaatgtacgtctggagcagatagcatgtgtatttagttcca 717

                                                                       
Query: 233 tagatagagaattattgtgggtaggcgcctttaatgcttggtttgagttgaagcatttag 292
           |||  ||||||  |||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 716 taggcagagaagcattgtgggtaggagcctttaatgcatggtttgagttgaagcatttag 657

                                                                       
Query: 293 acttcgtgatagggtaaaggcatcagaatagccagtagaaaaagtttttcagattttgaa 352
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acttcgtgatagggtaaaaacatcagaatagccagtagaaaaagtttttcagattttgaa 597

                                                                       
Query: 353 ttccaattctggcctagaaagaggaaatagggtgttctgtcttgatgacaggcaactctc 412
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 596 ttccaattctggcctagaaagaggaaatagggtgttctgtcttgatggcaggcaactctc 537

                                                                       
Query: 413 agccacaaatggcaaaa-tttaaacgtatttgaaattctaatcacagaagattgatcact 471
           ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 536 agccacaaatggcaaaattttaaa-gtatttgaaattctaatcacaaaagattgatcact 478

                                                                       
Query: 472 gaatcacataaagctaaaaagactgaagggagaaaagaccaaccatcgaacaaaaaagtg 531
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaatcgcataaagctaaaaagactgaagggagaaaagaccaaccatcgaacaaaaaagtg 418

                                                                       
Query: 532 ggtaaaatacacgaaaaaataatttaaaaaaaaacaaccaagactgttaacaaatgacat 591
           | ||||||||||||||||||||||   ||||||| || ||||||||||||||||||| ||
Sbjct: 417 gataaaatacacgaaaaaataatt---aaaaaaataatcaagactgttaacaaatgatat 361

                                                                       
Query: 592 ttaaacatatgagtaaattcacaatctcactaacaatgaaagaaaaagtaaatgaaacta 651
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 360 ttaaacatatgagaaaattcacaatctcactaacaatgaaagagaaagtaaatgaaacta 301

                             
Query: 652 tcattttttt-atgtgtt 668
           |||||||||| |||||||
Sbjct: 300 tcattttttttatgtgtt 283


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)