Query= MSMg01no505_n08.b1 MSMg01no505_n08.b1 CHROMAT_FILE:
MSMg01no505_n08.b1 PHD_FILE: MSMg01no505_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:50 2005
(673 letters)
>mm_chr1_68090064_68091136
Length = 1073
Score = 1270 bits (657), Expect = 0.0
Identities = 669/677 (98%), Gaps = 8/677 (1%)
Strand = Plus / Plus
Query: 1 aaagtgcctgttgctgtatgttatcttagtttcagttatcacccaagttacagacatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagtgcctgttgctgtatgttatcttagtttcagttatcacccaagttacagacatcta 260
Query: 61 agacatctacacaggcagcttacacgacctacagccagttcttgactcactgttggcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacatctacacaggcagcttacacgacctacagccagttcttgactcactgttggcaaa 320
Query: 121 ggcaaaatgaggaaattataggaagacaagagaagaaatgtggttaagagagaagaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaaaatgaggaaattataggaagacaagagaagaaatgtggttaagagagaagaccta 380
Query: 181 aactcctaaaggatgaaggccgattgtgagatacttactcccgacatgggggtgtaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactcctaaaggatgaaggccgattgtgagatacttactcccgacatgggggtgtaggca 440
Query: 241 ggagga----tttttgtgtccaatttcactctaataggaaagaaaaatggaatgatggat 296
|||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaggagggct----gtgtccaatttcactctaataggaaagaaaaatggaatgatggat 496
Query: 297 ataataagaggcaacatggatggaaaaaaaaagaaaggagaaagaaaagatacgatttgc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ataataagaggcaacatggatggaaaaaaaaagaaaggagaaagaaaagatacgatttgc 556
Query: 357 atgagccaaaggggaaaggcgcaacagtgatttttctttttttcctaaatagtcaaactg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgagccaaaggggaaaggcgcaacagtgatttttctttttttcctaaatagtcaaactg 616
Query: 417 tgttcattctcactacaagcaagcaaattaaaaagccaattctaccctgagacaaagaaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgttcattctcactacaagcaagcaaattaaaaagccaattctaccctgagacaaagaaa 676
Query: 477 gtcatattgaaaaagtaacttttaatgatttaaaaaaaaactaaggctgacatggaaatc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gtcatattgaaaaagtaacttttaatgatttaaaaaaaaactaaggctgacatggaaatc 736
Query: 537 atcattttttttaactaaccctagaagactggggttggggctggggagagctaggaataa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atcattttttttaactaaccctagaagactggggttggggctggggagagctaggaataa 796
Query: 597 ggaaactatgttttaaaagaaaggatagtttgttttttcacatgtcaaaagaccaaagca 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ggaaactatgttttaaaagaaaggatagtttgttttttcacatgtcaaaagaccaaagca 856
Query: 657 gctccctgctatttaaa 673
|||||||||||||||||
Sbjct: 857 gctccctgctatttaaa 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_n08.g1 MSMg01no505_n08.g1 CHROMAT_FILE:
MSMg01no505_n08.g1 PHD_FILE: MSMg01no505_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:50 2005
(566 letters)
>mm_chr1_68229817_68230782
Length = 966
Score = 777 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 1 agtagatgcacagaaaaggggggatgggattgtttgcattcatatcagaaaccaagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agtagatgcacagaaaaggggggatgggattgtttgcattcatatcagaaaccaagaaaa 343
Query: 61 gcacccttactctgtgactctacagctttcactaaagaccagaaggggaaaaaaaatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcacccttactctgtgactctacagctttcactaaagaccagaaggggaaaaaaaatcag 283
Query: 121 tagtttctctggattgttttagataaagaatgtccagagaagccacccagcagagactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tagtttctctggattgttttagataaagaatgtccagagaagccacccagcagagactcc 223
Query: 181 ctcaaatgctccagcagttggcaccgaggaagctattccagcaacctgcaggccatgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctcaaatgctccagcagttggcaccgaggaagctattccagcaacctgcaggccatgtgc 163
Query: 241 tatgtttgtctttttgcctaaggcatttgccaattatgtgtgctataaatgtacgcagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tatgtttgtctttttgcctaaggcatttgccaattatgtgtgctataaatgtacgcagat 103
Query: 301 ctcccttccataggcaaaagtcaaagacgtgagcgatgctttcctacgctcctgtttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ctcccttccataggcaaaagtcaaagacgtgagcgatgctttcctacgctcctgtttatt 43
Query: 361 aaagagaatgaagaattctgtgtggaatgaaagcaatatttt 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 aaagagaatgaagaattctgtgtggaatgaaagcaatatttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
