GGGAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCGAGAGGATGC
GCGGAATTCTCTGCTTTGCTCTGTCCCCCATTTTTTAGTTGGGTTGTCTG
GTATTTTGGTGTCTAATTTCCTGAGTTCTTTATATATTTTGGATATTAGT
CCTCTGCTAGATGTAGGATCGGTGAAGATCCTTCCCATTCTTTAAAGTGC
TGTTTTATCCTATTGATGGTGTTCTTATCTTTGCAGAAGATTTTCAGTTT
ATTGAGGTCTTATTTATTAATTGTTGATCTTAGTTCTGTTCAGAAATTTG
TCTCTTGTGTCAATGTGTTCAAGGCAGTTCCCCAATTTCTCTTCCACTTG
GTTTACTGTTTACAGTTTTATGTTGAGGTCTTTGAGTCATTGAACTTGAG
TTTTGTGTAGGGTAGGAAATATGAGTCTATTTACATTCCTTTACATGCAG
ATATCAAGTTAGATCTTCATTATTTGTTGAAAATGCTTTCTTTTTTTTGC
ATTTTATATTTTTTATTTATTTGTCAAAAACTCAAGTGTCCATAGGTGTG
TGGGTGTATTACTGGGTCCTCAATTATATTCTTTTTATCATCTTCTCTGT
TTTTGTGTGAATAACATGTGAGTTTATTTACTAATGCCCTCTATTACAGC
CTGAAATCAGGAATAGTCTTACCTCCAGAAGTTCGTTTATTGTACAAGAT
TGTTTTAGCTATCCTGATGGTTTTTTTGTTTGGTTTGTTTTGTTTTG

AGGACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTAGTTAAAAGCCCTTTTG
TACTTACTTAAAATGAAGACTCTTGTAAAGGAGACCTCTTCAATTAAAAG
ACAATGTGCCTGGGACAAAAAGGTACAGTGAGTAAGAGTGCTTGCTCTGG
AAAATTGAAGACTCAAGTCAGATCACAGCACTTGCATAACAAGTTGGCAT
GAGCATGTATACGTACATATTCAGTGTTGTGGGGGATGAAGATAGACCCT
GAGGTTTGTAGACCACCAATCCAGATGCAGTTTAATAAGAGAGTCAGTCT
CAAGGACATATGATAGAGCCATAGAGCAGAACACTCATCACCTTCTCATA
TTGGCCCATGAGGGTGCACCTGCTCATTCATATATATATATGTGCGTGCG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCACTCCCG
CTTGCCCATTCATAGATACACAGAATTCTGGACTGGAAGCTAGATTCTAT
ATTGAGAAAAGAACTTACATAGTACCTTGTATTGTCCTTATTCACACGTT
AGGCAAGTTCCCTGTTTGAATGATGGTGTCTTCCATCCTTTTGTAAATTT
TTAACCCCTAATTTATCTTGGTCTTAGTTTAAATTAGGGGACCTATAGTT
ATTGCTTTCCTTGAATGGATACACCCTCTGGTATATTTCCTTAACCTCCT
GAATCTTTTCTCTTA

Query= MSMg01no506_o10.g1 MSMg01no506_o10.g1 CHROMAT_FILE:
MSMg01no506_o10.g1 PHD_FILE: MSMg01no506_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:15 2005
         (414 letters)



>mm_chr1_124991361_124992174
          Length = 814

 Score =  698 bits (361), Expect = 0.0
 Identities = 409/447 (91%), Gaps = 34/447 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtagttaaaagcccttttgtacttacttaaaatgaagactcttgtaaaggagacctctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagttaaaagcccttttgtacttacttaaaatgaagactcttgtaaaggagacctctt 260

                                                                       
Query: 61  caattaaaagacaatgtgcctgggacaaaaaggtacagtgagtaagagtgcttgctctgg 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caattaaaagacaatgttcctgggacaaaaaggtacagtgagtaagagtgcttgctctgg 320

                                                                       
Query: 121 aaaattgaagactcaagtcagatcacagcacttgcataacaagttggcatgagcatgtat 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacttgaagactcaagtcagatcacagcacttgcataacaagttggcatgagcatgtat 380

                                                                       
Query: 181 acgtacatattcagtgttgtgggggatgaagatagaccctgaggtttgtagaccaccaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 381 acgtacatattcagtgttgtgggggatgaagatagaccctgaggtttgtagaccaccaac 440

                                                                       
Query: 241 ccagatgcagtttaataagagagtcagtctcaaggacatatgatagagccatagagcaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 441 ccagatgcagtttaataagagagtcagtctcaaggacatatgatagagccatagagcagg 500

                                                                       
Query: 301 acactcatcaccttctcatattggcccatgagggtgcacctgctcattcatatatatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactcatcaccttctcatattggcccatgagggtgcacctgctcattcatatatatata 560

                                                                       
Query: 361 t----------------------------------gtgcgtgcgtgtgtgtgtgtgtgtg 386
           |                                  |||||||||||||||||||||||||
Sbjct: 561 tatatatatatatatatatatatatatatatatatgtgcgtgcgtgtgtgtgtgtgtgtg 620

                                      
Query: 387 tgtgtgtgtgtgtgtgcgcgcgcgcgc 413
           |||||||||||||||||||||||||||
Sbjct: 621 tgtgtgtgtgtgtgtgcgcgcgcgcgc 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)