Query= MSMg01no511_d23.b1 MSMg01no511_d23.b1 CHROMAT_FILE:
MSMg01no511_d23.b1 PHD_FILE: MSMg01no511_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:03 2005
(630 letters)
>mm_chr1_163454300_163455329
Length = 1030
Score = 845 bits (437), Expect = 0.0
Identities = 446/451 (98%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 180 tgtctacctcataaaatcagtttatgagtatttcttctctatattttttcttagaaattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 tgtctacctcataaaatcagtttatgagtatttcttctctatattttttcttagaaattt 971
Query: 240 gtcaataattagtattacttgatgaaatggtataattcactcactgaagcaatcaaattt 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 970 gtcaataattagtattacttgctgaaatggtataattcactcactgaagcaatcaaattt 911
Query: 300 ggtgctttttaatggaatttttattattgatttggtgtctttatgcatgattcctccatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ggtgctttttaatggaatttttattattgatttggtgtctttatgcatgattcctc---- 855
Query: 360 cattcacattttctatttttcatgtgtatttctaaaaattcatatttttttaagttttac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 cattcacattttctatttttcatgtgtatttctaaaaattcatatttttttaagttttac 795
Query: 420 agtttgatctgttactttttatagcaatctttgtaatcctttccatttcagtggtaaaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 agtttgatctgttactttttatagcaatctttgtaatcctttccatttcagtggtaaaat 735
Query: 480 ctttaacacatctatatatctatttccacttctgattttgagccttccctcttttttcta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctttaacacatctatatatctatttccacttctgattttgagccttccctcttttttcta 675
Query: 540 aatatttgtttattttgtagtttcaaaggaatatctgtatttattgatatattcagaatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aatatttgtttattttgtagtttcaaaggaatatctgtatttattgatatattcagaatt 615
Query: 600 ttctagttctttgtttctgctctgcctttta 630
|||||||||||||||||||||||||||||||
Sbjct: 614 ttctagttctttgtttctgctctgcctttta 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_d23.g1 MSMg01no511_d23.g1 CHROMAT_FILE:
MSMg01no511_d23.g1 PHD_FILE: MSMg01no511_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:03 2005
(478 letters)
>mm_chr1_163307201_163308078
Length = 878
Score = 901 bits (466), Expect = 0.0
Identities = 475/478 (99%)
Strand = Plus / Plus
Query: 1 acctttacatactcccctctcataaaataacttttatcattttctttagatttttcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttacatactcccctctcataaaataacttttatcattttctttagatttttcttcc 260
Query: 61 acacaaatgctcaatgtatttttctagattgatagtaagcaatagaaacgggatgaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacaaatgctcaatgtatttttctagattgatagtaagcaatagaaacgggatgaattg 320
Query: 121 taaccaagttctcactgagatttttaaaaaatttttattttattattttgagtgtatggg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 taaccaagttctcactgagattttttaaaaatttttattttattattttgagtgtatggg 380
Query: 181 tgtttgcctgcatgtgtgttgccttaatgtttctactgatgtgttaaaacatcatgacca 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttgcctgcatgtgtgttgccttagtgtttctactgatgtgttaaaacatcatgacca 440
Query: 241 atatagagagtttatttgacttacatatcttaaatcacagtcaactgatgaaatccaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatagagagtttatttgacttacatatcttaaatcacagtcaactgatgaaatccaagg 500
Query: 301 taagaactcaagcagggttggaagctacaggcaggagctgatgcagagaccatggaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagaactcaagcagggttggaagctacaggcaggagctgatgcagagaccatggaggga 560
Query: 361 tgttgcttactggcttgctcttcgtggcttgctcagcctgctttcttataggacccagga 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 tgttgcttactggcttgctcttcgtggcttgttcagcctgctttcttataggacccagga 620
Query: 421 ccatcagaacaggaatagcaccacccttaatggtctgggcccttgcacattaatcacc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccatcagaacaggaatagcaccacccttaatggtctgggcccttgcacattaatcacc 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
