ACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGTGTACCCACATATGTGCAGTGTCCTTGGAAGCTAGAAGGT
GTCAAATCTGTGGAACTGGAGTTTCAGATGACAGAGGTCTCACAGGATGC
TGGGACTTGAACTCAGGTCCTCTTGCAGAGGAGCGTTTGCTCTTAACCAC
CAAGCTCTCTCCAGCCTTTCAGTTTTCACATGTGCAGTTCAGCTCATTAA
AGATTGTTCACACTGTCACACAGCATCATCTCTGCCTCTCTAGGACCATT
TCACCATCAGAAAGTGAAACTGCACCATTAAAACATAGCTCTCCATCCTC
CCATTCTAGGCCCTGACAACTAACCCGCATTACACTCTCTGTGTGCTTGA
ATTTGAGTGCTATAGGCACTTCTGGCGTTTTTTCACACAGGATAGTGTCT
TTCTGGTTTAACCATGTTGTAGCATATATCAAAATTTCATTTCTCCTCCC
TCCAATTTGGGTATTGTAATAAGAAATACATGGCATAAACTTTATTTTCC
TAAGCGTTTTTGAGGTTTAGTCAGTTTGGTGGCTAAGTTCACACTGTTCT
CGTTAGCATTCCTCCCCATAACTCCTCTCTGTGACATTTCACCTGCTGCT
CCACTGCCCCTCCCCTTGTTTCCTACTGTCTGCCCCAGGTGTCTCACACA
TGTAGAAATAAACCCTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTACACAGAGAAA
CCCTGTCAAAAAAAAAAAAAAGAAAAGAAAAGAAAGGAAGGAAGGAAGGA
AAAAAGAAAAGCACAGCCCTGTCCTTCCTTTCTACCTCTTTTTTCTTATG
AATTCTAACCAAAGCCTAGCTTATGCTGTGCCCGATGGGCTGGGATTCCT
CACTCTTTGAAACTACCCACCCTGCTTCTGCCGTGTGACTTGCTCTCTCC
TCCATCTTCCTCCTCTGGAAGCTCCCTGTCCTATAGGTTTTCTATCAAAA
CACTGGGAGGGGGGAAATCCCAATTTCCCCAGTAATGCAATCGCACCAGT
TCACAGTTGTATCCGCAGAAGTAAGGGTCCTTCTAGAGGGGTTCTGGGGG
CTTGAGGCTTGGGACAGGGGCTTGGTGGGTAGAGCAGAAACAGGTGGGTA
GGATTAGAAGCAGAAAGAATATATTAGAAGATAGAAAAGGGAATAGGGTG
TAACAAAAAATATTTTTAGTAGCTTTTCCTGATGCTGTGCATGGGGTATA
GGCTTTCCAGCATGACACCGCCTAACTTGGGCTTTCGCACCCATGCACTG
TGTGTGATACACGGGGCTCTACACACTCTTTCTTGAAGTCTCATTAATAT
TTTAAGACTACACCCAGACGTAGAATGTGTGG

Query= MSMg01no511_e03.g1 MSMg01no511_e03.g1 CHROMAT_FILE:
MSMg01no511_e03.g1 PHD_FILE: MSMg01no511_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:04 2005
         (554 letters)



>mm_chr1_194609260_194610215
          Length = 956

 Score = 1000 bits (517), Expect = 0.0
 Identities = 551/571 (96%), Gaps = 17/571 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggacagccagggctacacagagaaaccctgtcaaaaaaaaaa-----------aaaag 49
           ||||||||||||||||||||||||||||||||||||||||||||           |||||
Sbjct: 186 caggacagccagggctacacagagaaaccctgtcaaaaaaaaaagaaaagaaaagaaaag 245

                                                                       
Query: 50  aaaagaaaaga----aaggaaggaaggaaggaaaaaagaaaagcacagccctgtccttcc 105
           |||||||||||    |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaaagaaaagaaaagaaggaaggaaggaaggaaaaaagaaaagcacagccctgtccttcc 305

                                                                       
Query: 106 tttctacctcttttttcttatgaattctaaccaaagcctagcttatgctgtgcccgatgg 165
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tttctacctcttttttcttgtgaattctaaccaaagcctagcttatgctgtgcccgatgg 365

                                                                       
Query: 166 gctgggattcctcactctttgaaactacccaccctgcttctgccgtgtgacttgctctct 225
           |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 366 gctgggattcctcactctttgaaactacccaccctgcttccgccgtgtggcttgctctct 425

                                                                       
Query: 226 cctccatcttcctcctctggaagctccctgtcctataggttttctatcaaaacactggga 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cctccatcttcctcctctggaagctccctgtcctataggttttctatcaaaacactggga 485

                                                                       
Query: 286 gggggg-aaatcccaatttccccagtaatgcaatcgcaccagttcacagttgtatccgca 344
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gggggggaaatcccaatttccccagtaatgcaatcgcaccagttcacagttgtatccgca 545

                                                                       
Query: 345 gaagtaagggtccttctagaggggttctgggggcttgaggcttgggacaggggcttggtg 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaagtaagggtccttctagaggggttctgggggcttgaggcttgggacaggggcttggtg 605

                                                                       
Query: 405 ggtagagcagaaacaggtgggtaggattagaagcagaaagaatatattagaagatagaaa 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggtagagcagaaacaggtgggtaggattagaagcagaaagaatatattagaagatagaaa 665

                                                                       
Query: 465 agggaatagggtgtaaca-aaaaatatttttagtagcttttcctgatgctgtgcatgggg 523
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agggaatagggtgtaacacaaaaatatttttagtagcttttcctgatgctgtgcatgggg 725

                                          
Query: 524 tataggctttccagcatgacaccgcctaact 554
           |||||||||||||||||||||||||||||||
Sbjct: 726 tataggctttccagcatgacaccgcctaact 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 956
Length adjustment: 10
Effective length of query: 544
Effective length of database: 946
Effective search space:   514624
Effective search space used:   514624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)