CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGATTTCCCATGGGAAAAGATGGATGATCATATTTGCTATCAT
ATTAGGAGTTTATTGTCTAGACTGTCTGAGTCTGAAATCTCAGTTTTTAT
GTAAATGCCGTCAGGTTTGGTCTGAACATAGAAGGGTCCACTTCTAGACA
CCACAGGAAACAGCTCCTTCATAGTATTTTCTGATGTTTAAAGTTTGTTG
GGAGGACTGGGGATTTCTTAGGGGTTGAATGGATGCCTGCCTGGATTCTT
GATTCTGAGCATGTTGTTGAGTTTAGACCTGAATAAGGGTCCTCCTTTTA
CCTTAAATGTCATCTTCAAATTAGAGACAACATCTCAGAGAATAGAATCA
GGTTTTTCATCTTTCAGAGAGAAAAGGGTATGAGGCACTCAACACAACAT
AATCAAATTTATGGGAGACTCTAAATCACCAAGATTAGATTTGGTCAAAA
TGAAGGCATTTTCTTCCTGGTGACATGCCAACCCCATCAGTAACTGATTC
TGTCTTACTGATGAGAAAGGTGTCAAAGGAACCATGTGATGCTCTTTTGG
AATATGCAGCCCAGCTGAGCAGTGAATGTTCCTATGTCTGATGCTGTTTC
TCATTGTGGTAGTGAAGTGTTCTTACTCCACTGTTTTGGATCTGCTTCAA
AGATCAAGAGAGGTA

CAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGGCAGTTCTCTAAACTAGTGACAC
CTGGATGAATAAATACTGGGTCCTTGAAATATTTCCCTGTAGTACACTAT
TGCAAAAACACATCACCAAGCATAATCCAGGGAAATAGACATTTATATCA
GGGCATTTATATATTGAGATCAGAAGAAATCATACATTTATATACACACA
CAAAATTGTATACTTAAAATTGTAAGTTAATTTACGTATACATAAAACGT
ATGTACTTATATATAAAACCACAGTGACAGAGGTGGTAAAAAAGTTAAAT
AAGAGTAAGAATAAAGAAATAGCTTTTTTAGGCTCCTATATAAGAAAAAT
TGGATGCTATAATTATGATGCAAGTAGACTTTGCCTGAGCTTGAGTGTTG
GCTGACACATGAGGACATCAGGCAGGTGACCTTCTATGCCTCAGGTTCCT
TATTTACAATCAATGGAAACAATAAATATCCTCATAGAATCATAATAAAT
TTAATGAGAAATAAAAATAAAGGGATTTTAGCTTGCAAAAAGTCTTTGAT
TTTTATCATTGCTGTGACTGATACTAAAACTTGATCAAATGTCACTTTCT
TTAATAATTTTCATAGCTTTACAAGACCTTGGAATGATCAGCGACTAGTT
TAAATCTATACAAACTTTAGATAATAATATGCCTTGACATA

Query= MSMg01no511_e15.b1 MSMg01no511_e15.b1 CHROMAT_FILE:
MSMg01no511_e15.b1 PHD_FILE: MSMg01no511_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:07 2005
         (664 letters)



>mm_chr1_15376992_15378055
          Length = 1064

 Score = 1224 bits (633), Expect = 0.0
 Identities = 642/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 20  ccatgggaaaagatggatgatcatatttgctatcatattaggagtttattgtctagactg 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccatgggaaaagatggatgatcatatttgctatcatattaggagtttattgtctagactg 279

                                                                       
Query: 80  tctgagtctgaaatctcagtttttatgtaaatgccgtcaggtttggtctgaacatagaag 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tctgagtctgaaatctcagtttttatgtaaatgccgtcaggtttggtctgaacatagaag 339

                                                                       
Query: 140 ggtccacttctagacaccacaggaaacagctccttcatagtattttctgatgtttaaagt 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggtccacttctagacaccacaggaaacagctccttcatagtattttctgatgtttaaagt 399

                                                                       
Query: 200 ttgttgggaggactggggatttcttaggggttgaatggatgcctgcctggattcttgatt 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttgttgggaggactggggatttcttaggggttgaatggatgcctgcctggattcttgatt 459

                                                                       
Query: 260 ctgagcatgttgttgagtttagacctgaataagggtcctccttttaccttaaatgtcatc 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctgagcatgttgttgagtttagacctgaataagggtcctccttttaccttaaatgtcatc 519

                                                                       
Query: 320 ttcaaattagagacaacatctcagagaatagaatcaggtttttcatctttcagagagaaa 379
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 520 ttcaaattagagacaacatctcagagaatagaatcaggtttttcatcattcagagagaaa 579

                                                                       
Query: 380 agggtatgaggcactcaacacaacataatcaaatttatgggagactctaaatcaccaaga 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agggtatgaggcactcaacacaacataatcaaatttatgggagactctaaatcaccaaga 639

                                                                       
Query: 440 ttagatttggtcaaaatgaaggcattttcttcctggtgacatgccaaccccatcagtaac 499
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 640 ttagatttggtcaaaatgaaggcattttcttcctggtgacataccaaccccatcagtaac 699

                                                                       
Query: 500 tgattctgtcttactgatgagaaaggtgtcaaaggaaccatgtgatgctcttttggaata 559
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgattctgtcttactgacgagaaaggtgtcaaaggaaccatgtgatgctcttttggaata 759

                                                                       
Query: 560 tgcagcccagctgagcagtgaatgttcctatgtctgatgctgtttctcattgtggtagtg 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tgcagcccagctgagcagtgaatgttcctatgtctgatgctgtttctcattgtggtagtg 819

                                                        
Query: 620 aagtgttcttactccactgttttggatctgcttcaaagatcaaga 664
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aagtgttcttactccactgttttggatctgcttcaaagatcaaga 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no511_e15.g1 MSMg01no511_e15.g1 CHROMAT_FILE:
MSMg01no511_e15.g1 PHD_FILE: MSMg01no511_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:07 2005
         (502 letters)



>mm_chr1_15552607_15553508
          Length = 902

 Score =  971 bits (502), Expect = 0.0
 Identities = 502/502 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggcagttctctaaactagtgacacctggatgaataaatactgggtccttgaaatatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aggcagttctctaaactagtgacacctggatgaataaatactgggtccttgaaatatttc 491

                                                                       
Query: 61  cctgtagtacactattgcaaaaacacatcaccaagcataatccagggaaatagacattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cctgtagtacactattgcaaaaacacatcaccaagcataatccagggaaatagacattta 431

                                                                       
Query: 121 tatcagggcatttatatattgagatcagaagaaatcatacatttatatacacacacaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tatcagggcatttatatattgagatcagaagaaatcatacatttatatacacacacaaaa 371

                                                                       
Query: 181 ttgtatacttaaaattgtaagttaatttacgtatacataaaacgtatgtacttatatata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgtatacttaaaattgtaagttaatttacgtatacataaaacgtatgtacttatatata 311

                                                                       
Query: 241 aaaccacagtgacagaggtggtaaaaaagttaaataagagtaagaataaagaaatagctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaaccacagtgacagaggtggtaaaaaagttaaataagagtaagaataaagaaatagctt 251

                                                                       
Query: 301 ttttaggctcctatataagaaaaattggatgctataattatgatgcaagtagactttgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttttaggctcctatataagaaaaattggatgctataattatgatgcaagtagactttgcc 191

                                                                       
Query: 361 tgagcttgagtgttggctgacacatgaggacatcaggcaggtgaccttctatgcctcagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgagcttgagtgttggctgacacatgaggacatcaggcaggtgaccttctatgcctcagg 131

                                                                       
Query: 421 ttccttatttacaatcaatggaaacaataaatatcctcatagaatcataataaatttaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttccttatttacaatcaatggaaacaataaatatcctcatagaatcataataaatttaat 71

                                 
Query: 481 gagaaataaaaataaagggatt 502
           ||||||||||||||||||||||
Sbjct: 70  gagaaataaaaataaagggatt 49


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)