Query= MSMg01no511_p15.b1 MSMg01no511_p15.b1 CHROMAT_FILE:
MSMg01no511_p15.b1 PHD_FILE: MSMg01no511_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:59 2005
(557 letters)
>mm_chr1_167324108_167325064
Length = 957
Score = 1007 bits (521), Expect = 0.0
Identities = 548/557 (98%)
Strand = Plus / Minus
Query: 1 aattcgtgttttattttattttattaagccatactttgtatattgtagaacaaattttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aattcgtgttttattttattttattaagccatactttgtatattgtagaacaaattttgg 560
Query: 61 ggaaaaatcacctttcaagtgggtcaataagactagtcacatctaattgttattgctcta 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 559 ggaaaaatcacctttcaagtgggtcagtaagactagtcacatctaattgttattgctcta 500
Query: 121 gtggtgaatgggattaaaaagaaaactgttcacaattactgccaaataaatgacacatgt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 499 gtggtgaatgggattaaaaagaaaactgttcacaatcactgccaaataaatgacacatgt 440
Query: 181 tggattatctggggatataaaaatacatgggaagttgaattcatgttattacaaaaatta 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tggattatttggggatataaaaatacatgggaagttgaattcatgttattacaaaaatta 380
Query: 241 gaaagtaattatgttcatatctgcttgcatcgctaatgcatccttctgcttacactccac 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaagtaattaggttcatatctgcttgcatcgctaatgcatccttctgcttacactccac 320
Query: 301 cttcgtcaccaaatataaccctttcttcttcttctttctacatttttgaactttagctac 360
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 319 cttcgtcaccaaatataaccctttcttgttctcctttctacatttttgaactttagctac 260
Query: 361 atttccatgtgtgtatacaaatttacaaatacacacacatatctctattgtaggctaggt 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attttcatgtgtgtatacaaatttacaaatacacacacatatctctattgtaggctaggt 200
Query: 421 tcacatatgcggcataacatgcaggtttttcttagtttgtgttccttgcttgatcttaca 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tcacatatgcggcgtaacatgcaggtttttcttagtttgtgttccttgcttgatcttaca 140
Query: 481 ctttcctgtcccatcttttcccctcagatgccatgatttcacttttctttacagatgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctttcctgtcccatcttttcccctcagatgccatgatttcacttttctttacagatgaac 80
Query: 541 tgtatctcattgcgtct 557
||||||||| |||||||
Sbjct: 79 tgtatctcactgcgtct 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_p15.g1 MSMg01no511_p15.g1 CHROMAT_FILE:
MSMg01no511_p15.g1 PHD_FILE: MSMg01no511_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:59 2005
(545 letters)
>mm_chr1_167142642_167143587
Length = 946
Score = 984 bits (509), Expect = 0.0
Identities = 537/547 (98%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 1 cacgcttcccagcagtctgtgt--tttaaagtactgtttatcctcagctttaggtcccca 58
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 201 cacgcttcccagcagtctgtgtgttttaaagtactgcttatcctcagctttaggtcccca 260
Query: 59 atgcctactccattaggagatagggagcaacactttgttcttcctttaacatatactggt 118
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 261 atgcctactccattaggagatagggagcaacactttgttcttcctttgacatagactggt 320
Query: 119 ttccttcttacctagtggcccccaggctcactttggggtacaggaaagttttctctgttg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccttcttacctagtggcccccaggctcactttggggtacaggaaagttttctctgttg 380
Query: 179 accttggctagcctgctgtgggcagctgtatctggttttcagggtgtggccttctcgaca 238
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 381 accttggctagcctgctgtgggcagccgtatctggttttcaggatgtggccttctcgaca 440
Query: 239 cttggacctcattcagcaatcagggggaaacccaaccttaaatcaatggtcccaagtgaa 298
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgcacctcattcagcaatc-gggggaaacccaaccttaaatcaatggtcccaagtgaa 499
Query: 299 gaacgtcaccagcaccctcccaccagaggcagcagtcctcagtattctgcatatgctact 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 gaacgtcaccagcaccctcccaccagaggcagcagtcctcagtattctgcatatgcaact 559
Query: 359 atggtccacgctgctttccagttcctcatcaagtcagccaagtttggcttccattccttc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atggtccacgctgctttccagttcctcatcaagtcagccaagtttggcttccattccttc 619
Query: 419 tttggtaggaattgtcctttgcctgtccaggactctccctccactcctcctccaggggca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttggtaggaattgtcctttgcctgtccaggactctccctccactcctcctccaggggca 679
Query: 479 agtaggctttgtcagatgcaatagggatgaaaacaggtttttgcagctttccccacaaca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtaggctttgtcagatgcaatagggatgaaaacaggtttttgcagctttccccacaaca 739
Query: 539 ccctaag 545
|||||||
Sbjct: 740 ccctaag 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
